Gene : Pp3c12_8410 P. patens v3.3
Genomic Order:  344 Name:  ? Pp3c12_8410
Secondary Identifier:  ? PAC:32972536
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_8410 0.5kb upstream 0.5kb upstream 1249 true Chr12: 5979789-5981037 Physcomitrium patens
Pp3c12_8410 0.5kb upstream 0.5kb upstream 500 false Chr12: 5980538-5981037 Physcomitrium patens
Pp3c12_8410 0.5kb downstream 0.5kb downstream 1249 true Chr12: 5979289-5980537 Physcomitrium patens
Pp3c12_8410 0.5kb downstream 0.5kb downstream 500 false Chr12: 5979289-5979788 Physcomitrium patens
Pp3c12_8410 1.0kb upstream 1.0kb upstream 1749 true Chr12: 5979789-5981537 Physcomitrium patens
Pp3c12_8410 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5980538-5981537 Physcomitrium patens
Pp3c12_8410 1.0kb downstream 1.0kb downstream 1749 true Chr12: 5978789-5980537 Physcomitrium patens
Pp3c12_8410 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5978789-5979788 Physcomitrium patens
Pp3c12_8410 2.0kb upstream 2.0kb upstream 2749 true Chr12: 5979789-5982537 Physcomitrium patens
Pp3c12_8410 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5980538-5982537 Physcomitrium patens
Pp3c12_8410 2.0kb downstream 2.0kb downstream 2749 true Chr12: 5977789-5980537 Physcomitrium patens
Pp3c12_8410 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5977789-5979788 Physcomitrium patens
Pp3c12_8410 5.0kb upstream 5.0kb upstream 5749 true Chr12: 5979789-5985537 Physcomitrium patens
Pp3c12_8410 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5980538-5985537 Physcomitrium patens
Pp3c12_8410 5.0kb downstream 5.0kb downstream 5749 true Chr12: 5974789-5980537 Physcomitrium patens
Pp3c12_8410 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5974789-5979788 Physcomitrium patens
Pp3c12_8410 10.0kb upstream 10.0kb upstream 10749 true Chr12: 5979789-5990537 Physcomitrium patens
Pp3c12_8410 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5980538-5990537 Physcomitrium patens
Pp3c12_8410 10.0kb downstream 10.0kb downstream 10749 true Chr12: 5969789-5980537 Physcomitrium patens
Pp3c12_8410 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5969789-5979788 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121334409 5274 Embryophyte Singleton cluster - no MSA
123371283 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain