Gene : Pp3c8_8470 P. patens v3.3
Defline:  (1 of 2) KOG1420 - Ca2+-activated K+ channel Slowpoke, alpha subunit Genomic Order:  379
Name:  ? Pp3c8_8470 Secondary Identifier:  ? PAC:32963975
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c8_8470 0.5kb upstream 0.5kb upstream 9809 true Chr08: 5237481-5247289 Physcomitrium patens
Pp3c8_8470 0.5kb upstream 0.5kb upstream 500 false Chr08: 5237481-5237980 Physcomitrium patens
Pp3c8_8470 0.5kb downstream 0.5kb downstream 9809 true Chr08: 5237981-5247789 Physcomitrium patens
Pp3c8_8470 0.5kb downstream 0.5kb downstream 500 false Chr08: 5247290-5247789 Physcomitrium patens
Pp3c8_8470 1.0kb upstream 1.0kb upstream 10309 true Chr08: 5236981-5247289 Physcomitrium patens
Pp3c8_8470 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5236981-5237980 Physcomitrium patens
Pp3c8_8470 1.0kb downstream 1.0kb downstream 10309 true Chr08: 5237981-5248289 Physcomitrium patens
Pp3c8_8470 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5247290-5248289 Physcomitrium patens
Pp3c8_8470 2.0kb upstream 2.0kb upstream 11309 true Chr08: 5235981-5247289 Physcomitrium patens
Pp3c8_8470 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5235981-5237980 Physcomitrium patens
Pp3c8_8470 2.0kb downstream 2.0kb downstream 11309 true Chr08: 5237981-5249289 Physcomitrium patens
Pp3c8_8470 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5247290-5249289 Physcomitrium patens
Pp3c8_8470 5.0kb upstream 5.0kb upstream 14309 true Chr08: 5232981-5247289 Physcomitrium patens
Pp3c8_8470 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5232981-5237980 Physcomitrium patens
Pp3c8_8470 5.0kb downstream 5.0kb downstream 14309 true Chr08: 5237981-5252289 Physcomitrium patens
Pp3c8_8470 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5247290-5252289 Physcomitrium patens
Pp3c8_8470 10.0kb upstream 10.0kb upstream 19309 true Chr08: 5227981-5247289 Physcomitrium patens
Pp3c8_8470 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5227981-5237980 Physcomitrium patens
Pp3c8_8470 10.0kb downstream 10.0kb downstream 19309 true Chr08: 5237981-5257289 Physcomitrium patens
Pp3c8_8470 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5247290-5257289 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343567 5274 Embryophyte View MSA
123427734 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.391        
cufflinks 0.364       Low
cufflinks 2.262        
cufflinks 2.746        
cufflinks 0.3       Low
cufflinks 1.314        
cufflinks 2.291        
cufflinks 1.467        
cufflinks 1.667        
cufflinks 1.295        
cufflinks 1.418        
cufflinks 1.29        
cufflinks 1.949        
cufflinks 0.106       Low
cufflinks 2.586        
cufflinks 0.679        
cufflinks 2.084        
cufflinks 3.463       High
cufflinks 2.57        
cufflinks 1.167        
cufflinks 3.724       High
cufflinks 1.365        
cufflinks 2.848       High
cufflinks 0.788        
cufflinks 1.129        
cufflinks 0.499        
cufflinks 0.136       Low
cufflinks 1.317        
cufflinks 0.493       Low
cufflinks 1.636        

0 Strain