Gene : Pp3c4_19280 P. patens v3.3
Defline:  (1 of 3) PTHR21625:SF0 - COILED-COIL DOMAIN-CONTAINING PROTEIN 65 Genomic Order:  908
Name:  ? Pp3c4_19280 Secondary Identifier:  ? PAC:32922278
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_19280 0.5kb upstream 0.5kb upstream 4193 true Chr04: 13098424-13102616 Physcomitrium patens
Pp3c4_19280 0.5kb upstream 0.5kb upstream 500 false Chr04: 13102117-13102616 Physcomitrium patens
Pp3c4_19280 0.5kb downstream 0.5kb downstream 4193 true Chr04: 13097924-13102116 Physcomitrium patens
Pp3c4_19280 0.5kb downstream 0.5kb downstream 500 false Chr04: 13097924-13098423 Physcomitrium patens
Pp3c4_19280 1.0kb upstream 1.0kb upstream 4693 true Chr04: 13098424-13103116 Physcomitrium patens
Pp3c4_19280 1.0kb upstream 1.0kb upstream 1000 false Chr04: 13102117-13103116 Physcomitrium patens
Pp3c4_19280 1.0kb downstream 1.0kb downstream 4693 true Chr04: 13097424-13102116 Physcomitrium patens
Pp3c4_19280 1.0kb downstream 1.0kb downstream 1000 false Chr04: 13097424-13098423 Physcomitrium patens
Pp3c4_19280 2.0kb upstream 2.0kb upstream 5693 true Chr04: 13098424-13104116 Physcomitrium patens
Pp3c4_19280 2.0kb upstream 2.0kb upstream 2000 false Chr04: 13102117-13104116 Physcomitrium patens
Pp3c4_19280 2.0kb downstream 2.0kb downstream 5693 true Chr04: 13096424-13102116 Physcomitrium patens
Pp3c4_19280 2.0kb downstream 2.0kb downstream 2000 false Chr04: 13096424-13098423 Physcomitrium patens
Pp3c4_19280 5.0kb upstream 5.0kb upstream 8693 true Chr04: 13098424-13107116 Physcomitrium patens
Pp3c4_19280 5.0kb upstream 5.0kb upstream 5000 false Chr04: 13102117-13107116 Physcomitrium patens
Pp3c4_19280 5.0kb downstream 5.0kb downstream 8693 true Chr04: 13093424-13102116 Physcomitrium patens
Pp3c4_19280 5.0kb downstream 5.0kb downstream 5000 false Chr04: 13093424-13098423 Physcomitrium patens
Pp3c4_19280 10.0kb upstream 10.0kb upstream 13693 true Chr04: 13098424-13112116 Physcomitrium patens
Pp3c4_19280 10.0kb upstream 10.0kb upstream 10000 false Chr04: 13102117-13112116 Physcomitrium patens
Pp3c4_19280 10.0kb downstream 10.0kb downstream 13693 true Chr04: 13088424-13102116 Physcomitrium patens
Pp3c4_19280 10.0kb downstream 10.0kb downstream 10000 false Chr04: 13088424-13098423 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342562 5274 Embryophyte View MSA
123427310 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.004     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain