Gene : Pp3c2_25580 P. patens v3.3
Defline:  (1 of 1) PTHR19211:SF7 - ABC TRANSPORTER-RELATED PROTEIN Genomic Order:  1256
Name:  ? Pp3c2_25580 Secondary Identifier:  ? PAC:32934908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c2_25580 0.5kb upstream 0.5kb upstream 6602 true Chr02: 17293424-17300025 Physcomitrium patens
Pp3c2_25580 0.5kb upstream 0.5kb upstream 500 false Chr02: 17293424-17293923 Physcomitrium patens
Pp3c2_25580 0.5kb downstream 0.5kb downstream 6602 true Chr02: 17293924-17300525 Physcomitrium patens
Pp3c2_25580 0.5kb downstream 0.5kb downstream 500 false Chr02: 17300026-17300525 Physcomitrium patens
Pp3c2_25580 1.0kb upstream 1.0kb upstream 7102 true Chr02: 17292924-17300025 Physcomitrium patens
Pp3c2_25580 1.0kb upstream 1.0kb upstream 1000 false Chr02: 17292924-17293923 Physcomitrium patens
Pp3c2_25580 1.0kb downstream 1.0kb downstream 7102 true Chr02: 17293924-17301025 Physcomitrium patens
Pp3c2_25580 1.0kb downstream 1.0kb downstream 1000 false Chr02: 17300026-17301025 Physcomitrium patens
Pp3c2_25580 2.0kb upstream 2.0kb upstream 8102 true Chr02: 17291924-17300025 Physcomitrium patens
Pp3c2_25580 2.0kb upstream 2.0kb upstream 2000 false Chr02: 17291924-17293923 Physcomitrium patens
Pp3c2_25580 2.0kb downstream 2.0kb downstream 8102 true Chr02: 17293924-17302025 Physcomitrium patens
Pp3c2_25580 2.0kb downstream 2.0kb downstream 2000 false Chr02: 17300026-17302025 Physcomitrium patens
Pp3c2_25580 5.0kb upstream 5.0kb upstream 11102 true Chr02: 17288924-17300025 Physcomitrium patens
Pp3c2_25580 5.0kb upstream 5.0kb upstream 5000 false Chr02: 17288924-17293923 Physcomitrium patens
Pp3c2_25580 5.0kb downstream 5.0kb downstream 11102 true Chr02: 17293924-17305025 Physcomitrium patens
Pp3c2_25580 5.0kb downstream 5.0kb downstream 5000 false Chr02: 17300026-17305025 Physcomitrium patens
Pp3c2_25580 10.0kb upstream 10.0kb upstream 16102 true Chr02: 17283924-17300025 Physcomitrium patens
Pp3c2_25580 10.0kb upstream 10.0kb upstream 10000 false Chr02: 17283924-17293923 Physcomitrium patens
Pp3c2_25580 10.0kb downstream 10.0kb downstream 16102 true Chr02: 17293924-17310025 Physcomitrium patens
Pp3c2_25580 10.0kb downstream 10.0kb downstream 10000 false Chr02: 17300026-17310025 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351584 5274 Embryophyte View MSA
123427699 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 478.559     High High
cufflinks 296.938     High  
cufflinks 391.609     High High
cufflinks 136.362     High  
cufflinks 244.991     High  
cufflinks 205.393     High  
cufflinks 11.436       Low
cufflinks 362.588     High  
cufflinks 143.981     High  
cufflinks 154.383     High  
cufflinks 428.825     High High
cufflinks 287.345     High  
cufflinks 153.391     High  
cufflinks 232.054     High  
cufflinks 295.438     High  
cufflinks 19.606     High Low
cufflinks 66.35     High  
cufflinks 184.764     High  
cufflinks 293.346     High  
cufflinks 27.948     High Low
cufflinks 226.834     High  
cufflinks 160.483     High  
cufflinks 37.341     High Low
cufflinks 9.746       Low
cufflinks 162.21     High  
cufflinks 91.487     High  
cufflinks 18.453     High Low
cufflinks 207.345     High  
cufflinks 181.797     High  
cufflinks 126.782     High  

0 Strain