Gene : Pp3s32_450 P. patens v3.3
Defline:  (1 of 2) PTHR30146//PTHR30146:SF50 - LACI-RELATED TRANSCRIPTIONAL REPRESSOR Genomic Order:  47
Name:  ? Pp3s32_450 Secondary Identifier:  ? PAC:32948368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3s32_450 0.5kb upstream 0.5kb upstream 2098 true scaffold_32: 161721-163818 Physcomitrium patens
Pp3s32_450 0.5kb upstream 0.5kb upstream 500 false scaffold_32: 161721-162220 Physcomitrium patens
Pp3s32_450 0.5kb downstream 0.5kb downstream 2098 true scaffold_32: 162221-164318 Physcomitrium patens
Pp3s32_450 0.5kb downstream 0.5kb downstream 500 false scaffold_32: 163819-164318 Physcomitrium patens
Pp3s32_450 1.0kb upstream 1.0kb upstream 2598 true scaffold_32: 161221-163818 Physcomitrium patens
Pp3s32_450 1.0kb upstream 1.0kb upstream 1000 false scaffold_32: 161221-162220 Physcomitrium patens
Pp3s32_450 1.0kb downstream 1.0kb downstream 2598 true scaffold_32: 162221-164818 Physcomitrium patens
Pp3s32_450 1.0kb downstream 1.0kb downstream 1000 false scaffold_32: 163819-164818 Physcomitrium patens
Pp3s32_450 2.0kb upstream 2.0kb upstream 3598 true scaffold_32: 160221-163818 Physcomitrium patens
Pp3s32_450 2.0kb upstream 2.0kb upstream 2000 false scaffold_32: 160221-162220 Physcomitrium patens
Pp3s32_450 2.0kb downstream 2.0kb downstream 3598 true scaffold_32: 162221-165818 Physcomitrium patens
Pp3s32_450 2.0kb downstream 2.0kb downstream 2000 false scaffold_32: 163819-165818 Physcomitrium patens
Pp3s32_450 5.0kb upstream 5.0kb upstream 6598 true scaffold_32: 157221-163818 Physcomitrium patens
Pp3s32_450 5.0kb upstream 5.0kb upstream 5000 false scaffold_32: 157221-162220 Physcomitrium patens
Pp3s32_450 5.0kb downstream 5.0kb downstream 6598 true scaffold_32: 162221-168818 Physcomitrium patens
Pp3s32_450 5.0kb downstream 5.0kb downstream 5000 false scaffold_32: 163819-168818 Physcomitrium patens
Pp3s32_450 10.0kb upstream 10.0kb upstream 11598 true scaffold_32: 152221-163818 Physcomitrium patens
Pp3s32_450 10.0kb upstream 10.0kb upstream 10000 false scaffold_32: 152221-162220 Physcomitrium patens
Pp3s32_450 10.0kb downstream 10.0kb downstream 11598 true scaffold_32: 162221-173818 Physcomitrium patens
Pp3s32_450 10.0kb downstream 10.0kb downstream 10000 false scaffold_32: 163819-173818 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121331364 5274 Embryophyte Singleton cluster - no MSA
123368301 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain