Gene : Pp3c23_17140 P. patens v3.3
Genomic Order:  758 Name:  ? Pp3c23_17140
Secondary Identifier:  ? PAC:32950300
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c23_17140 0.5kb upstream 0.5kb upstream 3973 true Chr23: 11283754-11287726 Physcomitrium patens
Pp3c23_17140 0.5kb upstream 0.5kb upstream 500 false Chr23: 11287227-11287726 Physcomitrium patens
Pp3c23_17140 0.5kb downstream 0.5kb downstream 3973 true Chr23: 11283254-11287226 Physcomitrium patens
Pp3c23_17140 0.5kb downstream 0.5kb downstream 500 false Chr23: 11283254-11283753 Physcomitrium patens
Pp3c23_17140 1.0kb upstream 1.0kb upstream 4473 true Chr23: 11283754-11288226 Physcomitrium patens
Pp3c23_17140 1.0kb upstream 1.0kb upstream 1000 false Chr23: 11287227-11288226 Physcomitrium patens
Pp3c23_17140 1.0kb downstream 1.0kb downstream 4473 true Chr23: 11282754-11287226 Physcomitrium patens
Pp3c23_17140 1.0kb downstream 1.0kb downstream 1000 false Chr23: 11282754-11283753 Physcomitrium patens
Pp3c23_17140 2.0kb upstream 2.0kb upstream 5473 true Chr23: 11283754-11289226 Physcomitrium patens
Pp3c23_17140 2.0kb upstream 2.0kb upstream 2000 false Chr23: 11287227-11289226 Physcomitrium patens
Pp3c23_17140 2.0kb downstream 2.0kb downstream 5473 true Chr23: 11281754-11287226 Physcomitrium patens
Pp3c23_17140 2.0kb downstream 2.0kb downstream 2000 false Chr23: 11281754-11283753 Physcomitrium patens
Pp3c23_17140 5.0kb upstream 5.0kb upstream 8473 true Chr23: 11283754-11292226 Physcomitrium patens
Pp3c23_17140 5.0kb upstream 5.0kb upstream 5000 false Chr23: 11287227-11292226 Physcomitrium patens
Pp3c23_17140 5.0kb downstream 5.0kb downstream 8473 true Chr23: 11278754-11287226 Physcomitrium patens
Pp3c23_17140 5.0kb downstream 5.0kb downstream 5000 false Chr23: 11278754-11283753 Physcomitrium patens
Pp3c23_17140 10.0kb upstream 10.0kb upstream 13473 true Chr23: 11283754-11297226 Physcomitrium patens
Pp3c23_17140 10.0kb upstream 10.0kb upstream 10000 false Chr23: 11287227-11297226 Physcomitrium patens
Pp3c23_17140 10.0kb downstream 10.0kb downstream 13473 true Chr23: 11273754-11287226 Physcomitrium patens
Pp3c23_17140 10.0kb downstream 10.0kb downstream 10000 false Chr23: 11273754-11283753 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342874 5274 Embryophyte View MSA
123427165 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low
cufflinks 0.275        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.395       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.226        
cufflinks 0.04     Low  
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low Low
cufflinks 0.036     Low  
cufflinks 0.098     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.128        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.402       High
cufflinks 0.232        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  

0 Strain