Gene : Pp3c19_19190 P. patens v3.3
Defline:  (1 of 20) PF00069//PF08263 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  879
Name:  ? Pp3c19_19190 Secondary Identifier:  ? PAC:32939043
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Genomics

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Expression

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11 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c19_19190 0.5kb upstream 0.5kb upstream 4913 true Chr19: 12727029-12731941 Physcomitrium patens
Pp3c19_19190 0.5kb upstream 0.5kb upstream 500 false Chr19: 12731442-12731941 Physcomitrium patens
Pp3c19_19190 0.5kb downstream 0.5kb downstream 4913 true Chr19: 12726529-12731441 Physcomitrium patens
Pp3c19_19190 0.5kb downstream 0.5kb downstream 500 false Chr19: 12726529-12727028 Physcomitrium patens
Pp3c19_19190 1.0kb upstream 1.0kb upstream 5413 true Chr19: 12727029-12732441 Physcomitrium patens
Pp3c19_19190 1.0kb upstream 1.0kb upstream 1000 false Chr19: 12731442-12732441 Physcomitrium patens
Pp3c19_19190 1.0kb downstream 1.0kb downstream 5413 true Chr19: 12726029-12731441 Physcomitrium patens
Pp3c19_19190 1.0kb downstream 1.0kb downstream 1000 false Chr19: 12726029-12727028 Physcomitrium patens
Pp3c19_19190 2.0kb upstream 2.0kb upstream 6413 true Chr19: 12727029-12733441 Physcomitrium patens
Pp3c19_19190 2.0kb upstream 2.0kb upstream 2000 false Chr19: 12731442-12733441 Physcomitrium patens
Pp3c19_19190 2.0kb downstream 2.0kb downstream 6413 true Chr19: 12725029-12731441 Physcomitrium patens
Pp3c19_19190 2.0kb downstream 2.0kb downstream 2000 false Chr19: 12725029-12727028 Physcomitrium patens
Pp3c19_19190 5.0kb upstream 5.0kb upstream 9413 true Chr19: 12727029-12736441 Physcomitrium patens
Pp3c19_19190 5.0kb upstream 5.0kb upstream 5000 false Chr19: 12731442-12736441 Physcomitrium patens
Pp3c19_19190 5.0kb downstream 5.0kb downstream 9413 true Chr19: 12722029-12731441 Physcomitrium patens
Pp3c19_19190 5.0kb downstream 5.0kb downstream 5000 false Chr19: 12722029-12727028 Physcomitrium patens
Pp3c19_19190 10.0kb upstream 10.0kb upstream 14413 true Chr19: 12727029-12741441 Physcomitrium patens
Pp3c19_19190 10.0kb upstream 10.0kb upstream 10000 false Chr19: 12731442-12741441 Physcomitrium patens
Pp3c19_19190 10.0kb downstream 10.0kb downstream 14413 true Chr19: 12717029-12731441 Physcomitrium patens
Pp3c19_19190 10.0kb downstream 10.0kb downstream 10000 false Chr19: 12717029-12727028 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123429169 5275 Viridiplantae View MSA
121351227 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.664     High  
cufflinks 16.082        
cufflinks 109.502     High High
cufflinks 24.51     High  
cufflinks 1.958       Low
cufflinks 152.12     High High
cufflinks 0.228       Low
cufflinks 2.945       Low
cufflinks 13.416        
cufflinks 1.426       Low
cufflinks 91.134     High  
cufflinks 58.846     High  
cufflinks 16.293        
cufflinks 77.265     High  
cufflinks 22.914     High  
cufflinks 26.334     High  
cufflinks 43.859     High  
cufflinks 23.381     High  
cufflinks 20.451     High  
cufflinks 6.663        
cufflinks 24.301     High  
cufflinks 12.541        
cufflinks 58.817     High  
cufflinks 42.018     High  
cufflinks 34.253     High  
cufflinks 37.257     High  
cufflinks 111.049     High High
cufflinks 120.156     High High
cufflinks 34.799     High  
cufflinks 7.821        

0 Strain