Gene : Bradi4g32230 B. distachyon v3.1
Defline:  (1 of 1) PTHR13832//PTHR13832:SF320 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED Genomic Order:  4141
Name:  ? Bradi4g32230 Secondary Identifier:  ? PAC:32783033
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g32230 0.5kb upstream 0.5kb upstream 6064 true Bd4: 37818428-37824491 Brachypodium distachyon
Bradi4g32230 0.5kb upstream 0.5kb upstream 500 false Bd4: 37823992-37824491 Brachypodium distachyon
Bradi4g32230 0.5kb downstream 0.5kb downstream 6064 true Bd4: 37817928-37823991 Brachypodium distachyon
Bradi4g32230 0.5kb downstream 0.5kb downstream 500 false Bd4: 37817928-37818427 Brachypodium distachyon
Bradi4g32230 1.0kb upstream 1.0kb upstream 6564 true Bd4: 37818428-37824991 Brachypodium distachyon
Bradi4g32230 1.0kb upstream 1.0kb upstream 1000 false Bd4: 37823992-37824991 Brachypodium distachyon
Bradi4g32230 1.0kb downstream 1.0kb downstream 6564 true Bd4: 37817428-37823991 Brachypodium distachyon
Bradi4g32230 1.0kb downstream 1.0kb downstream 1000 false Bd4: 37817428-37818427 Brachypodium distachyon
Bradi4g32230 2.0kb upstream 2.0kb upstream 7564 true Bd4: 37818428-37825991 Brachypodium distachyon
Bradi4g32230 2.0kb upstream 2.0kb upstream 2000 false Bd4: 37823992-37825991 Brachypodium distachyon
Bradi4g32230 2.0kb downstream 2.0kb downstream 7564 true Bd4: 37816428-37823991 Brachypodium distachyon
Bradi4g32230 2.0kb downstream 2.0kb downstream 2000 false Bd4: 37816428-37818427 Brachypodium distachyon
Bradi4g32230 5.0kb upstream 5.0kb upstream 10564 true Bd4: 37818428-37828991 Brachypodium distachyon
Bradi4g32230 5.0kb upstream 5.0kb upstream 5000 false Bd4: 37823992-37828991 Brachypodium distachyon
Bradi4g32230 5.0kb downstream 5.0kb downstream 10564 true Bd4: 37813428-37823991 Brachypodium distachyon
Bradi4g32230 5.0kb downstream 5.0kb downstream 5000 false Bd4: 37813428-37818427 Brachypodium distachyon
Bradi4g32230 10.0kb upstream 10.0kb upstream 15564 true Bd4: 37818428-37833991 Brachypodium distachyon
Bradi4g32230 10.0kb upstream 10.0kb upstream 10000 false Bd4: 37823992-37833991 Brachypodium distachyon
Bradi4g32230 10.0kb downstream 10.0kb downstream 15564 true Bd4: 37808428-37823991 Brachypodium distachyon
Bradi4g32230 10.0kb downstream 10.0kb downstream 10000 false Bd4: 37808428-37818427 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569693 5269 Grass View MSA
122046774 5273 Angiosperm View MSA
121349947 5274 Embryophyte View MSA
123428260 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.218        
cufflinks 0.189        
cufflinks 0.119        
cufflinks 0.245        
cufflinks 0.154        
cufflinks 0.227        
cufflinks 0.191        
cufflinks 0.193        
cufflinks 0.213        
cufflinks 0.18        
cufflinks 0.118        
cufflinks 0.252        
cufflinks 0.144        
cufflinks 0.082       Low
cufflinks 0.327       High
cufflinks 0.246        
cufflinks 0.271        
cufflinks 0.072     Low Low
cufflinks 0.231        
cufflinks 0.075     Low Low
cufflinks 0.215        
cufflinks 0.204        
cufflinks 0.2        
cufflinks 0.277        
cufflinks 0.229        
cufflinks 0.199        
cufflinks 0.151        
cufflinks 0.131        
cufflinks 0.118        
cufflinks 0.448       High

0 Strain