Gene : Bradi4g37550 B. distachyon v3.1
Defline:  (1 of 1) PTHR12686 - 3'-5' EXORIBONUCLEASE CSL4-RELATED Genomic Order:  4841
Name:  ? Bradi4g37550 Secondary Identifier:  ? PAC:32788024
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g37550 0.5kb upstream 0.5kb upstream 3396 true Bd4: 42553376-42556771 Brachypodium distachyon
Bradi4g37550 0.5kb upstream 0.5kb upstream 500 false Bd4: 42553376-42553875 Brachypodium distachyon
Bradi4g37550 0.5kb downstream 0.5kb downstream 3396 true Bd4: 42553876-42557271 Brachypodium distachyon
Bradi4g37550 0.5kb downstream 0.5kb downstream 500 false Bd4: 42556772-42557271 Brachypodium distachyon
Bradi4g37550 1.0kb upstream 1.0kb upstream 3896 true Bd4: 42552876-42556771 Brachypodium distachyon
Bradi4g37550 1.0kb upstream 1.0kb upstream 1000 false Bd4: 42552876-42553875 Brachypodium distachyon
Bradi4g37550 1.0kb downstream 1.0kb downstream 3896 true Bd4: 42553876-42557771 Brachypodium distachyon
Bradi4g37550 1.0kb downstream 1.0kb downstream 1000 false Bd4: 42556772-42557771 Brachypodium distachyon
Bradi4g37550 2.0kb upstream 2.0kb upstream 4896 true Bd4: 42551876-42556771 Brachypodium distachyon
Bradi4g37550 2.0kb upstream 2.0kb upstream 2000 false Bd4: 42551876-42553875 Brachypodium distachyon
Bradi4g37550 2.0kb downstream 2.0kb downstream 4896 true Bd4: 42553876-42558771 Brachypodium distachyon
Bradi4g37550 2.0kb downstream 2.0kb downstream 2000 false Bd4: 42556772-42558771 Brachypodium distachyon
Bradi4g37550 5.0kb upstream 5.0kb upstream 7896 true Bd4: 42548876-42556771 Brachypodium distachyon
Bradi4g37550 5.0kb upstream 5.0kb upstream 5000 false Bd4: 42548876-42553875 Brachypodium distachyon
Bradi4g37550 5.0kb downstream 5.0kb downstream 7896 true Bd4: 42553876-42561771 Brachypodium distachyon
Bradi4g37550 5.0kb downstream 5.0kb downstream 5000 false Bd4: 42556772-42561771 Brachypodium distachyon
Bradi4g37550 10.0kb upstream 10.0kb upstream 12896 true Bd4: 42543876-42556771 Brachypodium distachyon
Bradi4g37550 10.0kb upstream 10.0kb upstream 10000 false Bd4: 42543876-42553875 Brachypodium distachyon
Bradi4g37550 10.0kb downstream 10.0kb downstream 12896 true Bd4: 42553876-42566771 Brachypodium distachyon
Bradi4g37550 10.0kb downstream 10.0kb downstream 10000 false Bd4: 42556772-42566771 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026382 5273 Angiosperm View MSA
124576449 5269 Grass View MSA
121347552 5274 Embryophyte View MSA
123423947 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.107        
cufflinks 3.513        
cufflinks 2.721        
cufflinks 4.086        
cufflinks 3.224        
cufflinks 2.737        
cufflinks 3.308        
cufflinks 2.787        
cufflinks 2.793        
cufflinks 3.702        
cufflinks 1.176       Low
cufflinks 1.722        
cufflinks 0.686       Low
cufflinks 0.844       Low
cufflinks 2.01        
cufflinks 2.834        
cufflinks 5.013       High
cufflinks 5.178       High
cufflinks 4.247        
cufflinks 1.765        
cufflinks 5.027       High
cufflinks 2.028        
cufflinks 2.452        
cufflinks 2.369        
cufflinks 4.14        
cufflinks 3.652        
cufflinks 0.855       Low
cufflinks 3.407        
cufflinks 2.813        
cufflinks 3.794        

0 Strain