Gene : Bradi4g38690 B. distachyon v3.1
Defline:  (1 of 1) 2.7.11.1//6.3.2.19 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase // Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 Genomic Order:  4990
Name:  ? Bradi4g38690 Secondary Identifier:  ? PAC:32789307
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7511 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g38690 0.5kb upstream 0.5kb upstream 6682 true Bd4: 43460696-43467377 Brachypodium distachyon
Bradi4g38690 0.5kb upstream 0.5kb upstream 500 false Bd4: 43460696-43461195 Brachypodium distachyon
Bradi4g38690 0.5kb downstream 0.5kb downstream 6682 true Bd4: 43461196-43467877 Brachypodium distachyon
Bradi4g38690 0.5kb downstream 0.5kb downstream 500 false Bd4: 43467378-43467877 Brachypodium distachyon
Bradi4g38690 1.0kb upstream 1.0kb upstream 7182 true Bd4: 43460196-43467377 Brachypodium distachyon
Bradi4g38690 1.0kb upstream 1.0kb upstream 1000 false Bd4: 43460196-43461195 Brachypodium distachyon
Bradi4g38690 1.0kb downstream 1.0kb downstream 7182 true Bd4: 43461196-43468377 Brachypodium distachyon
Bradi4g38690 1.0kb downstream 1.0kb downstream 1000 false Bd4: 43467378-43468377 Brachypodium distachyon
Bradi4g38690 2.0kb upstream 2.0kb upstream 8182 true Bd4: 43459196-43467377 Brachypodium distachyon
Bradi4g38690 2.0kb upstream 2.0kb upstream 2000 false Bd4: 43459196-43461195 Brachypodium distachyon
Bradi4g38690 2.0kb downstream 2.0kb downstream 8182 true Bd4: 43461196-43469377 Brachypodium distachyon
Bradi4g38690 2.0kb downstream 2.0kb downstream 2000 false Bd4: 43467378-43469377 Brachypodium distachyon
Bradi4g38690 5.0kb upstream 5.0kb upstream 11182 true Bd4: 43456196-43467377 Brachypodium distachyon
Bradi4g38690 5.0kb upstream 5.0kb upstream 5000 false Bd4: 43456196-43461195 Brachypodium distachyon
Bradi4g38690 5.0kb downstream 5.0kb downstream 11182 true Bd4: 43461196-43472377 Brachypodium distachyon
Bradi4g38690 5.0kb downstream 5.0kb downstream 5000 false Bd4: 43467378-43472377 Brachypodium distachyon
Bradi4g38690 10.0kb upstream 10.0kb upstream 16182 true Bd4: 43451196-43467377 Brachypodium distachyon
Bradi4g38690 10.0kb upstream 10.0kb upstream 10000 false Bd4: 43451196-43461195 Brachypodium distachyon
Bradi4g38690 10.0kb downstream 10.0kb downstream 16182 true Bd4: 43461196-43477377 Brachypodium distachyon
Bradi4g38690 10.0kb downstream 10.0kb downstream 10000 false Bd4: 43467378-43477377 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121992712 5273 Angiosperm View MSA
124571326 5269 Grass View MSA
121263048 5274 Embryophyte View MSA
123301650 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.382        
cufflinks 0.134        
cufflinks 0.275        
cufflinks 0.145        
cufflinks 0.224        
cufflinks 0.094       Low
cufflinks 0.094       Low
cufflinks 0.115        
cufflinks 0.081     Low Low
cufflinks 0.177        
cufflinks 0.483       High
cufflinks 0.313        
cufflinks 0.174        
cufflinks 0.066       Low
cufflinks 0.325        
cufflinks 0.098       Low
cufflinks 0.097     Low Low
cufflinks 0.247        
cufflinks 0.655       High
cufflinks 1.096       High
cufflinks 0.165        
cufflinks 0.308        
cufflinks 0.153        
cufflinks 0.087     Low Low
cufflinks 0.063     Low Low
cufflinks 0.293        
cufflinks 0.46       High
cufflinks 0.411        
cufflinks 0.314        
cufflinks 0.437        

0 Strain