Gene : Bradi4g27017 B. distachyon v3.1
Defline:  (1 of 1) PTHR22835//PTHR22835:SF203 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  3444
Name:  ? Bradi4g27017 Secondary Identifier:  ? PAC:32784211
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon LIPAS-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27017 0.5kb upstream 0.5kb upstream 2454 true Bd4: 31935932-31938385 Brachypodium distachyon
Bradi4g27017 0.5kb upstream 0.5kb upstream 500 false Bd4: 31935932-31936431 Brachypodium distachyon
Bradi4g27017 0.5kb downstream 0.5kb downstream 2454 true Bd4: 31936432-31938885 Brachypodium distachyon
Bradi4g27017 0.5kb downstream 0.5kb downstream 500 false Bd4: 31938386-31938885 Brachypodium distachyon
Bradi4g27017 1.0kb upstream 1.0kb upstream 2954 true Bd4: 31935432-31938385 Brachypodium distachyon
Bradi4g27017 1.0kb upstream 1.0kb upstream 1000 false Bd4: 31935432-31936431 Brachypodium distachyon
Bradi4g27017 1.0kb downstream 1.0kb downstream 2954 true Bd4: 31936432-31939385 Brachypodium distachyon
Bradi4g27017 1.0kb downstream 1.0kb downstream 1000 false Bd4: 31938386-31939385 Brachypodium distachyon
Bradi4g27017 2.0kb upstream 2.0kb upstream 3954 true Bd4: 31934432-31938385 Brachypodium distachyon
Bradi4g27017 2.0kb upstream 2.0kb upstream 2000 false Bd4: 31934432-31936431 Brachypodium distachyon
Bradi4g27017 2.0kb downstream 2.0kb downstream 3954 true Bd4: 31936432-31940385 Brachypodium distachyon
Bradi4g27017 2.0kb downstream 2.0kb downstream 2000 false Bd4: 31938386-31940385 Brachypodium distachyon
Bradi4g27017 5.0kb upstream 5.0kb upstream 6954 true Bd4: 31931432-31938385 Brachypodium distachyon
Bradi4g27017 5.0kb upstream 5.0kb upstream 5000 false Bd4: 31931432-31936431 Brachypodium distachyon
Bradi4g27017 5.0kb downstream 5.0kb downstream 6954 true Bd4: 31936432-31943385 Brachypodium distachyon
Bradi4g27017 5.0kb downstream 5.0kb downstream 5000 false Bd4: 31938386-31943385 Brachypodium distachyon
Bradi4g27017 10.0kb upstream 10.0kb upstream 11954 true Bd4: 31926432-31938385 Brachypodium distachyon
Bradi4g27017 10.0kb upstream 10.0kb upstream 10000 false Bd4: 31926432-31936431 Brachypodium distachyon
Bradi4g27017 10.0kb downstream 10.0kb downstream 11954 true Bd4: 31936432-31948385 Brachypodium distachyon
Bradi4g27017 10.0kb downstream 10.0kb downstream 10000 false Bd4: 31938386-31948385 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994667 5273 Angiosperm View MSA
124585149 5269 Grass View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.13        
cufflinks 0.124        
cufflinks 0.25        
cufflinks 0.174        
cufflinks 0.109        
cufflinks 0.091        
cufflinks 0.108        
cufflinks 0.252        
cufflinks 0.102     Low  
cufflinks 0.332        
cufflinks 0.012     Low Low
cufflinks 0.18        
cufflinks 0.012     Low Low
cufflinks 0.016     Low Low
cufflinks 0.043     Low  
cufflinks 0.107        
cufflinks 0.221        
cufflinks 0.125     Low  
cufflinks 0.176     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.79       High
cufflinks 0.146        
cufflinks 0.106        
cufflinks 0.137        
cufflinks 0.149        
cufflinks 0.306        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.303        
cufflinks 0.151        
cufflinks 0.769       High

0 Strain