Gene : Bradi2g48540 B. distachyon v3.1
Genomic Order:  5833 Name:  ? Bradi2g48540
Secondary Identifier:  ? PAC:32781913
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g48540 0.5kb upstream 0.5kb upstream 1129 true Bd2: 48582818-48583946 Brachypodium distachyon
Bradi2g48540 0.5kb upstream 0.5kb upstream 500 false Bd2: 48582818-48583317 Brachypodium distachyon
Bradi2g48540 0.5kb downstream 0.5kb downstream 1129 true Bd2: 48583318-48584446 Brachypodium distachyon
Bradi2g48540 0.5kb downstream 0.5kb downstream 500 false Bd2: 48583947-48584446 Brachypodium distachyon
Bradi2g48540 1.0kb upstream 1.0kb upstream 1629 true Bd2: 48582318-48583946 Brachypodium distachyon
Bradi2g48540 1.0kb upstream 1.0kb upstream 1000 false Bd2: 48582318-48583317 Brachypodium distachyon
Bradi2g48540 1.0kb downstream 1.0kb downstream 1629 true Bd2: 48583318-48584946 Brachypodium distachyon
Bradi2g48540 1.0kb downstream 1.0kb downstream 1000 false Bd2: 48583947-48584946 Brachypodium distachyon
Bradi2g48540 2.0kb upstream 2.0kb upstream 2629 true Bd2: 48581318-48583946 Brachypodium distachyon
Bradi2g48540 2.0kb upstream 2.0kb upstream 2000 false Bd2: 48581318-48583317 Brachypodium distachyon
Bradi2g48540 2.0kb downstream 2.0kb downstream 2629 true Bd2: 48583318-48585946 Brachypodium distachyon
Bradi2g48540 2.0kb downstream 2.0kb downstream 2000 false Bd2: 48583947-48585946 Brachypodium distachyon
Bradi2g48540 5.0kb upstream 5.0kb upstream 5629 true Bd2: 48578318-48583946 Brachypodium distachyon
Bradi2g48540 5.0kb upstream 5.0kb upstream 5000 false Bd2: 48578318-48583317 Brachypodium distachyon
Bradi2g48540 5.0kb downstream 5.0kb downstream 5629 true Bd2: 48583318-48588946 Brachypodium distachyon
Bradi2g48540 5.0kb downstream 5.0kb downstream 5000 false Bd2: 48583947-48588946 Brachypodium distachyon
Bradi2g48540 10.0kb upstream 10.0kb upstream 10629 true Bd2: 48573318-48583946 Brachypodium distachyon
Bradi2g48540 10.0kb upstream 10.0kb upstream 10000 false Bd2: 48573318-48583317 Brachypodium distachyon
Bradi2g48540 10.0kb downstream 10.0kb downstream 10629 true Bd2: 48583318-48593946 Brachypodium distachyon
Bradi2g48540 10.0kb downstream 10.0kb downstream 10000 false Bd2: 48583947-48593946 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995431 5273 Angiosperm View MSA
124588289 5269 Grass View MSA
121265623 5274 Embryophyte View MSA
123304001 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.165        
cufflinks 0.02     Low Low
cufflinks 0.178        
cufflinks 0.026     Low Low
cufflinks 0.348        
cufflinks 0.044     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low Low
cufflinks 0.121        
cufflinks 1.197        
cufflinks 3.531       High
cufflinks 0.081     Low  
cufflinks 0.044     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.527        
cufflinks 0.033     Low Low
cufflinks 1.694        
cufflinks 0.389        
cufflinks 111.244     High High
cufflinks 12.593     High High
cufflinks 0.213        
cufflinks 0.246        
cufflinks 0.22        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078     Low  
cufflinks 0.158        
cufflinks 1.549        
cufflinks 0.421        
cufflinks 0.375        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain