Gene : Bradi2g15370 B. distachyon v3.1
Defline:  (1 of 2) PF01117 - Aerolysin toxin (Aerolysin) Genomic Order:  1954
Name:  ? Bradi2g15370 Secondary Identifier:  ? PAC:32776166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g15370 0.5kb upstream 0.5kb upstream 2418 true Bd2: 13700486-13702903 Brachypodium distachyon
Bradi2g15370 0.5kb upstream 0.5kb upstream 500 false Bd2: 13700486-13700985 Brachypodium distachyon
Bradi2g15370 0.5kb downstream 0.5kb downstream 2418 true Bd2: 13700986-13703403 Brachypodium distachyon
Bradi2g15370 0.5kb downstream 0.5kb downstream 500 false Bd2: 13702904-13703403 Brachypodium distachyon
Bradi2g15370 1.0kb upstream 1.0kb upstream 2918 true Bd2: 13699986-13702903 Brachypodium distachyon
Bradi2g15370 1.0kb upstream 1.0kb upstream 1000 false Bd2: 13699986-13700985 Brachypodium distachyon
Bradi2g15370 1.0kb downstream 1.0kb downstream 2918 true Bd2: 13700986-13703903 Brachypodium distachyon
Bradi2g15370 1.0kb downstream 1.0kb downstream 1000 false Bd2: 13702904-13703903 Brachypodium distachyon
Bradi2g15370 2.0kb upstream 2.0kb upstream 3918 true Bd2: 13698986-13702903 Brachypodium distachyon
Bradi2g15370 2.0kb upstream 2.0kb upstream 2000 false Bd2: 13698986-13700985 Brachypodium distachyon
Bradi2g15370 2.0kb downstream 2.0kb downstream 3918 true Bd2: 13700986-13704903 Brachypodium distachyon
Bradi2g15370 2.0kb downstream 2.0kb downstream 2000 false Bd2: 13702904-13704903 Brachypodium distachyon
Bradi2g15370 5.0kb upstream 5.0kb upstream 6918 true Bd2: 13695986-13702903 Brachypodium distachyon
Bradi2g15370 5.0kb upstream 5.0kb upstream 5000 false Bd2: 13695986-13700985 Brachypodium distachyon
Bradi2g15370 5.0kb downstream 5.0kb downstream 6918 true Bd2: 13700986-13707903 Brachypodium distachyon
Bradi2g15370 5.0kb downstream 5.0kb downstream 5000 false Bd2: 13702904-13707903 Brachypodium distachyon
Bradi2g15370 10.0kb upstream 10.0kb upstream 11918 true Bd2: 13690986-13702903 Brachypodium distachyon
Bradi2g15370 10.0kb upstream 10.0kb upstream 10000 false Bd2: 13690986-13700985 Brachypodium distachyon
Bradi2g15370 10.0kb downstream 10.0kb downstream 11918 true Bd2: 13700986-13712903 Brachypodium distachyon
Bradi2g15370 10.0kb downstream 10.0kb downstream 10000 false Bd2: 13702904-13712903 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029421 5273 Angiosperm View MSA
124590439 5269 Grass View MSA
121348691 5274 Embryophyte View MSA
123380974 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.801     High  
cufflinks 24.531     High  
cufflinks 27.833     High  
cufflinks 21.423     High  
cufflinks 39.697     High  
cufflinks 21.582     High  
cufflinks 25.85     High  
cufflinks 18.892     High  
cufflinks 19.19     High  
cufflinks 16.452     High  
cufflinks 0.127       Low
cufflinks 16.392     High  
cufflinks 0.305       Low
cufflinks 0.073       Low
cufflinks 10.388     High  
cufflinks 22.919     High  
cufflinks 15.652     High  
cufflinks 4.695        
cufflinks 18.409     High  
cufflinks 42.498     High  
cufflinks 0.02     Low Low
cufflinks 21.711     High  
cufflinks 22.79     High  
cufflinks 19.969     High  
cufflinks 18.462     High  
cufflinks 18.646     High  
cufflinks 0.026     Low Low
cufflinks 18.105     High  
cufflinks 24.36     High  
cufflinks 12.631     High  

0 Strain