Gene : Bradi1g66580 B. distachyon v3.1
Genomic Order:  8417 Name:  ? Bradi1g66580
Secondary Identifier:  ? PAC:32802959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g66580 0.5kb upstream 0.5kb upstream 2873 true Bd1: 65552044-65554916 Brachypodium distachyon
Bradi1g66580 0.5kb upstream 0.5kb upstream 500 false Bd1: 65552044-65552543 Brachypodium distachyon
Bradi1g66580 0.5kb downstream 0.5kb downstream 2873 true Bd1: 65552544-65555416 Brachypodium distachyon
Bradi1g66580 0.5kb downstream 0.5kb downstream 500 false Bd1: 65554917-65555416 Brachypodium distachyon
Bradi1g66580 1.0kb upstream 1.0kb upstream 3373 true Bd1: 65551544-65554916 Brachypodium distachyon
Bradi1g66580 1.0kb upstream 1.0kb upstream 1000 false Bd1: 65551544-65552543 Brachypodium distachyon
Bradi1g66580 1.0kb downstream 1.0kb downstream 3373 true Bd1: 65552544-65555916 Brachypodium distachyon
Bradi1g66580 1.0kb downstream 1.0kb downstream 1000 false Bd1: 65554917-65555916 Brachypodium distachyon
Bradi1g66580 2.0kb upstream 2.0kb upstream 4373 true Bd1: 65550544-65554916 Brachypodium distachyon
Bradi1g66580 2.0kb upstream 2.0kb upstream 2000 false Bd1: 65550544-65552543 Brachypodium distachyon
Bradi1g66580 2.0kb downstream 2.0kb downstream 4373 true Bd1: 65552544-65556916 Brachypodium distachyon
Bradi1g66580 2.0kb downstream 2.0kb downstream 2000 false Bd1: 65554917-65556916 Brachypodium distachyon
Bradi1g66580 5.0kb upstream 5.0kb upstream 7373 true Bd1: 65547544-65554916 Brachypodium distachyon
Bradi1g66580 5.0kb upstream 5.0kb upstream 5000 false Bd1: 65547544-65552543 Brachypodium distachyon
Bradi1g66580 5.0kb downstream 5.0kb downstream 7373 true Bd1: 65552544-65559916 Brachypodium distachyon
Bradi1g66580 5.0kb downstream 5.0kb downstream 5000 false Bd1: 65554917-65559916 Brachypodium distachyon
Bradi1g66580 10.0kb upstream 10.0kb upstream 12373 true Bd1: 65542544-65554916 Brachypodium distachyon
Bradi1g66580 10.0kb upstream 10.0kb upstream 10000 false Bd1: 65542544-65552543 Brachypodium distachyon
Bradi1g66580 10.0kb downstream 10.0kb downstream 12373 true Bd1: 65552544-65564916 Brachypodium distachyon
Bradi1g66580 10.0kb downstream 10.0kb downstream 10000 false Bd1: 65554917-65564916 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576223 5269 Grass View MSA
122046024 5273 Angiosperm View MSA
121347558 5274 Embryophyte View MSA
123380572 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.939        
cufflinks 10.464     High  
cufflinks 13.159     High High
cufflinks 10.64     High  
cufflinks 4.584       Low
cufflinks 8.557        
cufflinks 9.358        
cufflinks 6.618        
cufflinks 7.16        
cufflinks 12.745     High High
cufflinks 6.346        
cufflinks 6.281        
cufflinks 5.048       Low
cufflinks 5.974        
cufflinks 5.096       Low
cufflinks 8.463        
cufflinks 7.934        
cufflinks 11.604     High  
cufflinks 9.808        
cufflinks 2.751       Low
cufflinks 10.145        
cufflinks 11.165     High  
cufflinks 5.834        
cufflinks 6.456        
cufflinks 8.413        
cufflinks 15.448     High High
cufflinks 9.636     High  
cufflinks 15.385     High High
cufflinks 13.607     High High
cufflinks 10.681        

0 Strain