Gene : Bradi1g62320 B. distachyon v3.1
Defline:  (1 of 1) K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1) Genomic Order:  7889
Name:  ? Bradi1g62320 Secondary Identifier:  ? PAC:32793066
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g62320 0.5kb upstream 0.5kb upstream 12707 true Bd1: 61776928-61789634 Brachypodium distachyon
Bradi1g62320 0.5kb upstream 0.5kb upstream 500 false Bd1: 61789135-61789634 Brachypodium distachyon
Bradi1g62320 0.5kb downstream 0.5kb downstream 12707 true Bd1: 61776428-61789134 Brachypodium distachyon
Bradi1g62320 0.5kb downstream 0.5kb downstream 500 false Bd1: 61776428-61776927 Brachypodium distachyon
Bradi1g62320 1.0kb upstream 1.0kb upstream 13207 true Bd1: 61776928-61790134 Brachypodium distachyon
Bradi1g62320 1.0kb upstream 1.0kb upstream 1000 false Bd1: 61789135-61790134 Brachypodium distachyon
Bradi1g62320 1.0kb downstream 1.0kb downstream 13207 true Bd1: 61775928-61789134 Brachypodium distachyon
Bradi1g62320 1.0kb downstream 1.0kb downstream 1000 false Bd1: 61775928-61776927 Brachypodium distachyon
Bradi1g62320 2.0kb upstream 2.0kb upstream 14207 true Bd1: 61776928-61791134 Brachypodium distachyon
Bradi1g62320 2.0kb upstream 2.0kb upstream 2000 false Bd1: 61789135-61791134 Brachypodium distachyon
Bradi1g62320 2.0kb downstream 2.0kb downstream 14207 true Bd1: 61774928-61789134 Brachypodium distachyon
Bradi1g62320 2.0kb downstream 2.0kb downstream 2000 false Bd1: 61774928-61776927 Brachypodium distachyon
Bradi1g62320 5.0kb upstream 5.0kb upstream 17207 true Bd1: 61776928-61794134 Brachypodium distachyon
Bradi1g62320 5.0kb upstream 5.0kb upstream 5000 false Bd1: 61789135-61794134 Brachypodium distachyon
Bradi1g62320 5.0kb downstream 5.0kb downstream 17207 true Bd1: 61771928-61789134 Brachypodium distachyon
Bradi1g62320 5.0kb downstream 5.0kb downstream 5000 false Bd1: 61771928-61776927 Brachypodium distachyon
Bradi1g62320 10.0kb upstream 10.0kb upstream 22207 true Bd1: 61776928-61799134 Brachypodium distachyon
Bradi1g62320 10.0kb upstream 10.0kb upstream 10000 false Bd1: 61789135-61799134 Brachypodium distachyon
Bradi1g62320 10.0kb downstream 10.0kb downstream 22207 true Bd1: 61766928-61789134 Brachypodium distachyon
Bradi1g62320 10.0kb downstream 10.0kb downstream 10000 false Bd1: 61766928-61776927 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579407 5269 Grass View MSA
122043788 5273 Angiosperm View MSA
121344676 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.08        
cufflinks 9.68        
cufflinks 10.469     High  
cufflinks 7.403        
cufflinks 2.164       Low
cufflinks 8.451        
cufflinks 7.376        
cufflinks 7.291        
cufflinks 8.196        
cufflinks 4.91        
cufflinks 8.906     High  
cufflinks 9.666     High  
cufflinks 8.144     High  
cufflinks 7.073        
cufflinks 6.003        
cufflinks 8.506        
cufflinks 3.156       Low
cufflinks 8.883        
cufflinks 3.821        
cufflinks 1.7       Low
cufflinks 3.837        
cufflinks 10.898     High High
cufflinks 7.544        
cufflinks 7.214        
cufflinks 6.445        
cufflinks 8.586        
cufflinks 9.055     High  
cufflinks 8.0        
cufflinks 8.478        
cufflinks 7.682        

0 Strain