Gene : Bradi1g56260 B. distachyon v3.1
Defline:  (1 of 4) PF07468 - Agglutinin domain (Agglutinin) Genomic Order:  7056
Name:  ? Bradi1g56260 Secondary Identifier:  ? PAC:32803682
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g56260 0.5kb upstream 0.5kb upstream 3377 true Bd1: 55097479-55100855 Brachypodium distachyon
Bradi1g56260 0.5kb upstream 0.5kb upstream 500 false Bd1: 55100356-55100855 Brachypodium distachyon
Bradi1g56260 0.5kb downstream 0.5kb downstream 3377 true Bd1: 55096979-55100355 Brachypodium distachyon
Bradi1g56260 0.5kb downstream 0.5kb downstream 500 false Bd1: 55096979-55097478 Brachypodium distachyon
Bradi1g56260 1.0kb upstream 1.0kb upstream 3877 true Bd1: 55097479-55101355 Brachypodium distachyon
Bradi1g56260 1.0kb upstream 1.0kb upstream 1000 false Bd1: 55100356-55101355 Brachypodium distachyon
Bradi1g56260 1.0kb downstream 1.0kb downstream 3877 true Bd1: 55096479-55100355 Brachypodium distachyon
Bradi1g56260 1.0kb downstream 1.0kb downstream 1000 false Bd1: 55096479-55097478 Brachypodium distachyon
Bradi1g56260 2.0kb upstream 2.0kb upstream 4877 true Bd1: 55097479-55102355 Brachypodium distachyon
Bradi1g56260 2.0kb upstream 2.0kb upstream 2000 false Bd1: 55100356-55102355 Brachypodium distachyon
Bradi1g56260 2.0kb downstream 2.0kb downstream 4877 true Bd1: 55095479-55100355 Brachypodium distachyon
Bradi1g56260 2.0kb downstream 2.0kb downstream 2000 false Bd1: 55095479-55097478 Brachypodium distachyon
Bradi1g56260 5.0kb upstream 5.0kb upstream 7877 true Bd1: 55097479-55105355 Brachypodium distachyon
Bradi1g56260 5.0kb upstream 5.0kb upstream 5000 false Bd1: 55100356-55105355 Brachypodium distachyon
Bradi1g56260 5.0kb downstream 5.0kb downstream 7877 true Bd1: 55092479-55100355 Brachypodium distachyon
Bradi1g56260 5.0kb downstream 5.0kb downstream 5000 false Bd1: 55092479-55097478 Brachypodium distachyon
Bradi1g56260 10.0kb upstream 10.0kb upstream 12877 true Bd1: 55097479-55110355 Brachypodium distachyon
Bradi1g56260 10.0kb upstream 10.0kb upstream 10000 false Bd1: 55100356-55110355 Brachypodium distachyon
Bradi1g56260 10.0kb downstream 10.0kb downstream 12877 true Bd1: 55087479-55100355 Brachypodium distachyon
Bradi1g56260 10.0kb downstream 10.0kb downstream 10000 false Bd1: 55087479-55097478 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029421 5273 Angiosperm View MSA
124590439 5269 Grass View MSA
121348691 5274 Embryophyte View MSA
123380974 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.291        
cufflinks 3.337        
cufflinks 3.41        
cufflinks 2.432        
cufflinks 7.04       High
cufflinks 1.312        
cufflinks 1.716        
cufflinks 1.943        
cufflinks 1.343        
cufflinks 1.164        
cufflinks 0.412       Low
cufflinks 1.956        
cufflinks 0.294       Low
cufflinks 0.409       Low
cufflinks 2.181        
cufflinks 1.213        
cufflinks 1.063        
cufflinks 1.263        
cufflinks 6.001       High
cufflinks 2.565        
cufflinks 0.049     Low Low
cufflinks 1.388        
cufflinks 1.494        
cufflinks 1.322        
cufflinks 1.784        
cufflinks 2.758        
cufflinks 0.013     Low Low
cufflinks 1.747        
cufflinks 1.999        
cufflinks 0.606        

0 Strain