Gene : Bradi1g46310 B. distachyon v3.1
Defline:  (1 of 1) PTHR12280//PTHR12280:SF29 - PANTOTHENATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  5744
Name:  ? Bradi1g46310 Secondary Identifier:  ? PAC:32795510
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PANTO-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g46310 0.5kb upstream 0.5kb upstream 7118 true Bd1: 44993886-45001003 Brachypodium distachyon
Bradi1g46310 0.5kb upstream 0.5kb upstream 500 false Bd1: 45000504-45001003 Brachypodium distachyon
Bradi1g46310 0.5kb downstream 0.5kb downstream 7118 true Bd1: 44993386-45000503 Brachypodium distachyon
Bradi1g46310 0.5kb downstream 0.5kb downstream 500 false Bd1: 44993386-44993885 Brachypodium distachyon
Bradi1g46310 1.0kb upstream 1.0kb upstream 7618 true Bd1: 44993886-45001503 Brachypodium distachyon
Bradi1g46310 1.0kb upstream 1.0kb upstream 1000 false Bd1: 45000504-45001503 Brachypodium distachyon
Bradi1g46310 1.0kb downstream 1.0kb downstream 7618 true Bd1: 44992886-45000503 Brachypodium distachyon
Bradi1g46310 1.0kb downstream 1.0kb downstream 1000 false Bd1: 44992886-44993885 Brachypodium distachyon
Bradi1g46310 2.0kb upstream 2.0kb upstream 8618 true Bd1: 44993886-45002503 Brachypodium distachyon
Bradi1g46310 2.0kb upstream 2.0kb upstream 2000 false Bd1: 45000504-45002503 Brachypodium distachyon
Bradi1g46310 2.0kb downstream 2.0kb downstream 8618 true Bd1: 44991886-45000503 Brachypodium distachyon
Bradi1g46310 2.0kb downstream 2.0kb downstream 2000 false Bd1: 44991886-44993885 Brachypodium distachyon
Bradi1g46310 5.0kb upstream 5.0kb upstream 11618 true Bd1: 44993886-45005503 Brachypodium distachyon
Bradi1g46310 5.0kb upstream 5.0kb upstream 5000 false Bd1: 45000504-45005503 Brachypodium distachyon
Bradi1g46310 5.0kb downstream 5.0kb downstream 11618 true Bd1: 44988886-45000503 Brachypodium distachyon
Bradi1g46310 5.0kb downstream 5.0kb downstream 5000 false Bd1: 44988886-44993885 Brachypodium distachyon
Bradi1g46310 10.0kb upstream 10.0kb upstream 16618 true Bd1: 44993886-45010503 Brachypodium distachyon
Bradi1g46310 10.0kb upstream 10.0kb upstream 10000 false Bd1: 45000504-45010503 Brachypodium distachyon
Bradi1g46310 10.0kb downstream 10.0kb downstream 16618 true Bd1: 44983886-45000503 Brachypodium distachyon
Bradi1g46310 10.0kb downstream 10.0kb downstream 10000 false Bd1: 44983886-44993885 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122019957 5273 Angiosperm View MSA
124568300 5269 Grass View MSA
121290062 5274 Embryophyte View MSA
123328335 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.806        
cufflinks 1.054        
cufflinks 0.916        
cufflinks 0.98        
cufflinks 0.532       Low
cufflinks 0.961        
cufflinks 0.863        
cufflinks 0.775        
cufflinks 0.841        
cufflinks 0.764        
cufflinks 0.68        
cufflinks 1.024        
cufflinks 0.671        
cufflinks 0.779        
cufflinks 0.947        
cufflinks 1.065        
cufflinks 1.021        
cufflinks 1.473       High
cufflinks 0.893        
cufflinks 0.474       Low
cufflinks 1.15        
cufflinks 0.97        
cufflinks 0.815        
cufflinks 1.023        
cufflinks 1.012        
cufflinks 0.938        
cufflinks 0.643       Low
cufflinks 0.875        
cufflinks 0.94        
cufflinks 1.348       High

0 Strain