Gene : Bradi5g00710 B. distachyon v3.1
Defline:  (1 of 1) PTHR31371:SF2 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14B15 Genomic Order:  48
Name:  ? Bradi5g00710 Secondary Identifier:  ? PAC:32810104
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g00710 0.5kb upstream 0.5kb upstream 6414 true Bd5: 657397-663810 Brachypodium distachyon
Bradi5g00710 0.5kb upstream 0.5kb upstream 500 false Bd5: 663311-663810 Brachypodium distachyon
Bradi5g00710 0.5kb downstream 0.5kb downstream 6414 true Bd5: 656897-663310 Brachypodium distachyon
Bradi5g00710 0.5kb downstream 0.5kb downstream 500 false Bd5: 656897-657396 Brachypodium distachyon
Bradi5g00710 1.0kb upstream 1.0kb upstream 6914 true Bd5: 657397-664310 Brachypodium distachyon
Bradi5g00710 1.0kb upstream 1.0kb upstream 1000 false Bd5: 663311-664310 Brachypodium distachyon
Bradi5g00710 1.0kb downstream 1.0kb downstream 6914 true Bd5: 656397-663310 Brachypodium distachyon
Bradi5g00710 1.0kb downstream 1.0kb downstream 1000 false Bd5: 656397-657396 Brachypodium distachyon
Bradi5g00710 2.0kb upstream 2.0kb upstream 7914 true Bd5: 657397-665310 Brachypodium distachyon
Bradi5g00710 2.0kb upstream 2.0kb upstream 2000 false Bd5: 663311-665310 Brachypodium distachyon
Bradi5g00710 2.0kb downstream 2.0kb downstream 7914 true Bd5: 655397-663310 Brachypodium distachyon
Bradi5g00710 2.0kb downstream 2.0kb downstream 2000 false Bd5: 655397-657396 Brachypodium distachyon
Bradi5g00710 5.0kb upstream 5.0kb upstream 10914 true Bd5: 657397-668310 Brachypodium distachyon
Bradi5g00710 5.0kb upstream 5.0kb upstream 5000 false Bd5: 663311-668310 Brachypodium distachyon
Bradi5g00710 5.0kb downstream 5.0kb downstream 10914 true Bd5: 652397-663310 Brachypodium distachyon
Bradi5g00710 5.0kb downstream 5.0kb downstream 5000 false Bd5: 652397-657396 Brachypodium distachyon
Bradi5g00710 10.0kb upstream 10.0kb upstream 15914 true Bd5: 657397-673310 Brachypodium distachyon
Bradi5g00710 10.0kb upstream 10.0kb upstream 10000 false Bd5: 663311-673310 Brachypodium distachyon
Bradi5g00710 10.0kb downstream 10.0kb downstream 15914 true Bd5: 647397-663310 Brachypodium distachyon
Bradi5g00710 10.0kb downstream 10.0kb downstream 10000 false Bd5: 647397-657396 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582899 5269 Grass View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.26        
cufflinks 0.456        
cufflinks 0.49        
cufflinks 0.432        
cufflinks 0.455        
cufflinks 0.374        
cufflinks 0.417        
cufflinks 0.49        
cufflinks 0.361        
cufflinks 0.385        
cufflinks 0.212       Low
cufflinks 0.448        
cufflinks 0.192       Low
cufflinks 0.174       Low
cufflinks 0.275        
cufflinks 0.357        
cufflinks 0.313        
cufflinks 0.895       High
cufflinks 0.55        
cufflinks 0.274        
cufflinks 0.331        
cufflinks 0.386        
cufflinks 0.587        
cufflinks 0.325        
cufflinks 0.283        
cufflinks 0.402        
cufflinks 0.372        
cufflinks 0.444        
cufflinks 0.403        
cufflinks 0.641       High

0 Strain