Gene : Bradi1g13223 B. distachyon v3.1
Defline:  (1 of 3) 1.18.1.6 - Adrenodoxin-NADP(+) reductase / Nicotinamide adenine dinucleotide phosphate-adrenodoxin reductase Genomic Order:  1667
Name:  ? Bradi1g13223 Secondary Identifier:  ? PAC:32803313
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY0-1507 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g13223 0.5kb upstream 0.5kb upstream 3436 true Bd1: 10023830-10027265 Brachypodium distachyon
Bradi1g13223 0.5kb upstream 0.5kb upstream 500 false Bd1: 10023830-10024329 Brachypodium distachyon
Bradi1g13223 0.5kb downstream 0.5kb downstream 3436 true Bd1: 10024330-10027765 Brachypodium distachyon
Bradi1g13223 0.5kb downstream 0.5kb downstream 500 false Bd1: 10027266-10027765 Brachypodium distachyon
Bradi1g13223 1.0kb upstream 1.0kb upstream 3936 true Bd1: 10023330-10027265 Brachypodium distachyon
Bradi1g13223 1.0kb upstream 1.0kb upstream 1000 false Bd1: 10023330-10024329 Brachypodium distachyon
Bradi1g13223 1.0kb downstream 1.0kb downstream 3936 true Bd1: 10024330-10028265 Brachypodium distachyon
Bradi1g13223 1.0kb downstream 1.0kb downstream 1000 false Bd1: 10027266-10028265 Brachypodium distachyon
Bradi1g13223 2.0kb upstream 2.0kb upstream 4936 true Bd1: 10022330-10027265 Brachypodium distachyon
Bradi1g13223 2.0kb upstream 2.0kb upstream 2000 false Bd1: 10022330-10024329 Brachypodium distachyon
Bradi1g13223 2.0kb downstream 2.0kb downstream 4936 true Bd1: 10024330-10029265 Brachypodium distachyon
Bradi1g13223 2.0kb downstream 2.0kb downstream 2000 false Bd1: 10027266-10029265 Brachypodium distachyon
Bradi1g13223 5.0kb upstream 5.0kb upstream 7936 true Bd1: 10019330-10027265 Brachypodium distachyon
Bradi1g13223 5.0kb upstream 5.0kb upstream 5000 false Bd1: 10019330-10024329 Brachypodium distachyon
Bradi1g13223 5.0kb downstream 5.0kb downstream 7936 true Bd1: 10024330-10032265 Brachypodium distachyon
Bradi1g13223 5.0kb downstream 5.0kb downstream 5000 false Bd1: 10027266-10032265 Brachypodium distachyon
Bradi1g13223 10.0kb upstream 10.0kb upstream 12936 true Bd1: 10014330-10027265 Brachypodium distachyon
Bradi1g13223 10.0kb upstream 10.0kb upstream 10000 false Bd1: 10014330-10024329 Brachypodium distachyon
Bradi1g13223 10.0kb downstream 10.0kb downstream 12936 true Bd1: 10024330-10037265 Brachypodium distachyon
Bradi1g13223 10.0kb downstream 10.0kb downstream 10000 false Bd1: 10027266-10037265 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121902781 5273 Angiosperm View MSA
124475799 5269 Grass View MSA
121173301 5274 Embryophyte View MSA
123212168 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43        
cufflinks 2.277        
cufflinks 3.265       High
cufflinks 2.235        
cufflinks 1.022       Low
cufflinks 2.107        
cufflinks 2.019        
cufflinks 1.862        
cufflinks 2.155        
cufflinks 2.962        
cufflinks 1.947        
cufflinks 1.867        
cufflinks 2.19        
cufflinks 2.319        
cufflinks 1.285       Low
cufflinks 2.01        
cufflinks 2.344        
cufflinks 1.394        
cufflinks 2.628        
cufflinks 0.608       Low
cufflinks 1.362        
cufflinks 3.323       High
cufflinks 1.818        
cufflinks 1.918        
cufflinks 2.153        
cufflinks 3.703       High
cufflinks 2.782        
cufflinks 3.412       High
cufflinks 3.221       High
cufflinks 1.473        

0 Strain