Gene : Bradi1g09970 B. distachyon v3.1
Defline:  (1 of 1) K14810 - ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13] (DDX56, DBP9) Genomic Order:  1273
Name:  ? Bradi1g09970 Secondary Identifier:  ? PAC:32797469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g09970 0.5kb upstream 0.5kb upstream 9825 true Bd1: 7159031-7168855 Brachypodium distachyon
Bradi1g09970 0.5kb upstream 0.5kb upstream 500 false Bd1: 7168356-7168855 Brachypodium distachyon
Bradi1g09970 0.5kb downstream 0.5kb downstream 9825 true Bd1: 7158531-7168355 Brachypodium distachyon
Bradi1g09970 0.5kb downstream 0.5kb downstream 500 false Bd1: 7158531-7159030 Brachypodium distachyon
Bradi1g09970 1.0kb upstream 1.0kb upstream 10325 true Bd1: 7159031-7169355 Brachypodium distachyon
Bradi1g09970 1.0kb upstream 1.0kb upstream 1000 false Bd1: 7168356-7169355 Brachypodium distachyon
Bradi1g09970 1.0kb downstream 1.0kb downstream 10325 true Bd1: 7158031-7168355 Brachypodium distachyon
Bradi1g09970 1.0kb downstream 1.0kb downstream 1000 false Bd1: 7158031-7159030 Brachypodium distachyon
Bradi1g09970 2.0kb upstream 2.0kb upstream 11325 true Bd1: 7159031-7170355 Brachypodium distachyon
Bradi1g09970 2.0kb upstream 2.0kb upstream 2000 false Bd1: 7168356-7170355 Brachypodium distachyon
Bradi1g09970 2.0kb downstream 2.0kb downstream 11325 true Bd1: 7157031-7168355 Brachypodium distachyon
Bradi1g09970 2.0kb downstream 2.0kb downstream 2000 false Bd1: 7157031-7159030 Brachypodium distachyon
Bradi1g09970 5.0kb upstream 5.0kb upstream 14325 true Bd1: 7159031-7173355 Brachypodium distachyon
Bradi1g09970 5.0kb upstream 5.0kb upstream 5000 false Bd1: 7168356-7173355 Brachypodium distachyon
Bradi1g09970 5.0kb downstream 5.0kb downstream 14325 true Bd1: 7154031-7168355 Brachypodium distachyon
Bradi1g09970 5.0kb downstream 5.0kb downstream 5000 false Bd1: 7154031-7159030 Brachypodium distachyon
Bradi1g09970 10.0kb upstream 10.0kb upstream 19325 true Bd1: 7159031-7178355 Brachypodium distachyon
Bradi1g09970 10.0kb upstream 10.0kb upstream 10000 false Bd1: 7168356-7178355 Brachypodium distachyon
Bradi1g09970 10.0kb downstream 10.0kb downstream 19325 true Bd1: 7149031-7168355 Brachypodium distachyon
Bradi1g09970 10.0kb downstream 10.0kb downstream 10000 false Bd1: 7149031-7159030 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041039 5273 Angiosperm View MSA
124569814 5269 Grass View MSA
121343805 5274 Embryophyte View MSA
123424907 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.019        
cufflinks 4.241       High
cufflinks 3.159        
cufflinks 3.631        
cufflinks 1.105        
cufflinks 3.394        
cufflinks 3.283        
cufflinks 2.311        
cufflinks 2.91        
cufflinks 1.562        
cufflinks 1.143        
cufflinks 2.292        
cufflinks 0.588       Low
cufflinks 0.711       Low
cufflinks 1.045       Low
cufflinks 3.283        
cufflinks 3.451        
cufflinks 6.336       High
cufflinks 2.193        
cufflinks 1.264        
cufflinks 2.406        
cufflinks 2.219        
cufflinks 2.085        
cufflinks 2.417        
cufflinks 3.278        
cufflinks 2.169        
cufflinks 0.805       Low
cufflinks 1.557        
cufflinks 1.929        
cufflinks 3.29        

0 Strain