Gene : SWI3A A. thaliana TAIR10
Primary Identifier:  ? AT2G47620 Defline:  (1 of 1) PTHR12802//PTHR12802:SF2 - SWI/SNF COMPLEX-RELATED // SWI/SNF COMPLEX SUBUNIT SWI3A
Genomic Order:  4191 Name:  ? AT2G47620
Secondary Identifier:  ? PAC:19638874
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47620 0.5kb upstream 0.5kb upstream 2955 true Chr2: 19531447-19534401 Arabidopsis thaliana
AT2G47620 0.5kb upstream 0.5kb upstream 500 false Chr2: 19531447-19531946 Arabidopsis thaliana
AT2G47620 0.5kb downstream 0.5kb downstream 2955 true Chr2: 19531947-19534901 Arabidopsis thaliana
AT2G47620 0.5kb downstream 0.5kb downstream 500 false Chr2: 19534402-19534901 Arabidopsis thaliana
AT2G47620 1.0kb upstream 1.0kb upstream 3455 true Chr2: 19530947-19534401 Arabidopsis thaliana
AT2G47620 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19530947-19531946 Arabidopsis thaliana
AT2G47620 1.0kb downstream 1.0kb downstream 3455 true Chr2: 19531947-19535401 Arabidopsis thaliana
AT2G47620 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19534402-19535401 Arabidopsis thaliana
AT2G47620 2.0kb upstream 2.0kb upstream 4455 true Chr2: 19529947-19534401 Arabidopsis thaliana
AT2G47620 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19529947-19531946 Arabidopsis thaliana
AT2G47620 2.0kb downstream 2.0kb downstream 4455 true Chr2: 19531947-19536401 Arabidopsis thaliana
AT2G47620 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19534402-19536401 Arabidopsis thaliana
AT2G47620 5.0kb upstream 5.0kb upstream 7455 true Chr2: 19526947-19534401 Arabidopsis thaliana
AT2G47620 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19526947-19531946 Arabidopsis thaliana
AT2G47620 5.0kb downstream 5.0kb downstream 7455 true Chr2: 19531947-19539401 Arabidopsis thaliana
AT2G47620 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19534402-19539401 Arabidopsis thaliana
AT2G47620 10.0kb upstream 10.0kb upstream 12455 true Chr2: 19521947-19534401 Arabidopsis thaliana
AT2G47620 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19521947-19531946 Arabidopsis thaliana
AT2G47620 10.0kb downstream 10.0kb downstream 12455 true Chr2: 19531947-19544401 Arabidopsis thaliana
AT2G47620 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19534402-19544401 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370300 5261 Brassicaceae View MSA
123827472 5264 Brassicales-Malvales View MSA
124344198 5266 SBM View MSA
124244401 5268 Malvidae View MSA
124065857 5270 Rosid View MSA
123740148 5271 Pentapetalae View MSA
122792229 5272 Eudicot View MSA
122044148 5273 Angiosperm View MSA
121349753 5274 Embryophyte View MSA
123381428 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.309        
cufflinks 7.626       High
cufflinks 5.195        
cufflinks 7.95       High
cufflinks 4.658       Low
cufflinks 6.651        

0 Strain