Gene : SCPL9 A. thaliana TAIR10

Primary Identifier:  ? AT2G23010 Defline:  (1 of 16) 2.3.1.103 - Sinapoylglucose--sinapoylglucose O-sinapoyltransferase
Genomic Order:  1565 Name:  ? AT2G23010
Secondary Identifier:  ? PAC:19639562

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3301 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G23010 0.5kb upstream 0.5kb upstream 4332 true Chr2: 9798343-9802674 Arabidopsis thaliana
AT2G23010 0.5kb upstream 0.5kb upstream 500 false Chr2: 9798343-9798842 Arabidopsis thaliana
AT2G23010 0.5kb downstream 0.5kb downstream 4332 true Chr2: 9798843-9803174 Arabidopsis thaliana
AT2G23010 0.5kb downstream 0.5kb downstream 500 false Chr2: 9802675-9803174 Arabidopsis thaliana
AT2G23010 1.0kb upstream 1.0kb upstream 4832 true Chr2: 9797843-9802674 Arabidopsis thaliana
AT2G23010 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9797843-9798842 Arabidopsis thaliana
AT2G23010 1.0kb downstream 1.0kb downstream 4832 true Chr2: 9798843-9803674 Arabidopsis thaliana
AT2G23010 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9802675-9803674 Arabidopsis thaliana
AT2G23010 2.0kb upstream 2.0kb upstream 5832 true Chr2: 9796843-9802674 Arabidopsis thaliana
AT2G23010 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9796843-9798842 Arabidopsis thaliana
AT2G23010 2.0kb downstream 2.0kb downstream 5832 true Chr2: 9798843-9804674 Arabidopsis thaliana
AT2G23010 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9802675-9804674 Arabidopsis thaliana
AT2G23010 5.0kb upstream 5.0kb upstream 8832 true Chr2: 9793843-9802674 Arabidopsis thaliana
AT2G23010 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9793843-9798842 Arabidopsis thaliana
AT2G23010 5.0kb downstream 5.0kb downstream 8832 true Chr2: 9798843-9807674 Arabidopsis thaliana
AT2G23010 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9802675-9807674 Arabidopsis thaliana
AT2G23010 10.0kb upstream 10.0kb upstream 13832 true Chr2: 9788843-9802674 Arabidopsis thaliana
AT2G23010 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9788843-9798842 Arabidopsis thaliana
AT2G23010 10.0kb downstream 10.0kb downstream 13832 true Chr2: 9798843-9812674 Arabidopsis thaliana
AT2G23010 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9802675-9812674 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380420 5261 Brassicaceae View MSA
123841552 5264 Brassicales-Malvales View MSA
124347801 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74        
cufflinks 0.006     Low Low
cufflinks 1.826        
cufflinks 0.023     Low  
cufflinks 1.375        
cufflinks 0.021     Low  

0 Strain