Gene : AT2G25650 A. thaliana TAIR10
Defline:  (1 of 17) PTHR31662//PTHR31662:SF1 - FAMILY NOT NAMED // A_IG002N01.32 PROTEIN-RELATED Genomic Order:  1840
Name:  ? AT2G25650 Secondary Identifier:  ? PAC:19642655
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G25650 0.5kb upstream 0.5kb upstream 2131 true Chr2: 10914086-10916216 Arabidopsis thaliana
AT2G25650 0.5kb upstream 0.5kb upstream 500 false Chr2: 10914086-10914585 Arabidopsis thaliana
AT2G25650 0.5kb downstream 0.5kb downstream 2131 true Chr2: 10914586-10916716 Arabidopsis thaliana
AT2G25650 0.5kb downstream 0.5kb downstream 500 false Chr2: 10916217-10916716 Arabidopsis thaliana
AT2G25650 1.0kb upstream 1.0kb upstream 2631 true Chr2: 10913586-10916216 Arabidopsis thaliana
AT2G25650 1.0kb upstream 1.0kb upstream 1000 false Chr2: 10913586-10914585 Arabidopsis thaliana
AT2G25650 1.0kb downstream 1.0kb downstream 2631 true Chr2: 10914586-10917216 Arabidopsis thaliana
AT2G25650 1.0kb downstream 1.0kb downstream 1000 false Chr2: 10916217-10917216 Arabidopsis thaliana
AT2G25650 2.0kb upstream 2.0kb upstream 3631 true Chr2: 10912586-10916216 Arabidopsis thaliana
AT2G25650 2.0kb upstream 2.0kb upstream 2000 false Chr2: 10912586-10914585 Arabidopsis thaliana
AT2G25650 2.0kb downstream 2.0kb downstream 3631 true Chr2: 10914586-10918216 Arabidopsis thaliana
AT2G25650 2.0kb downstream 2.0kb downstream 2000 false Chr2: 10916217-10918216 Arabidopsis thaliana
AT2G25650 5.0kb upstream 5.0kb upstream 6631 true Chr2: 10909586-10916216 Arabidopsis thaliana
AT2G25650 5.0kb upstream 5.0kb upstream 5000 false Chr2: 10909586-10914585 Arabidopsis thaliana
AT2G25650 5.0kb downstream 5.0kb downstream 6631 true Chr2: 10914586-10921216 Arabidopsis thaliana
AT2G25650 5.0kb downstream 5.0kb downstream 5000 false Chr2: 10916217-10921216 Arabidopsis thaliana
AT2G25650 10.0kb upstream 10.0kb upstream 11631 true Chr2: 10904586-10916216 Arabidopsis thaliana
AT2G25650 10.0kb upstream 10.0kb upstream 10000 false Chr2: 10904586-10914585 Arabidopsis thaliana
AT2G25650 10.0kb downstream 10.0kb downstream 11631 true Chr2: 10914586-10926216 Arabidopsis thaliana
AT2G25650 10.0kb downstream 10.0kb downstream 10000 false Chr2: 10916217-10926216 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379352 5261 Brassicaceae View MSA
123802222 5264 Brassicales-Malvales View MSA
124350369 5266 SBM View MSA
124252419 5268 Malvidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.747        
cufflinks 13.892        
cufflinks 11.75       Low
cufflinks 16.669        
cufflinks 14.334        
cufflinks 16.285        

0 Strain