Gene : AT2G05790 A. thaliana TAIR10
Defline:  (1 of 1) PTHR32227:SF116 - O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN Genomic Order:  435
Name:  ? AT2G05790 Secondary Identifier:  ? PAC:19639804
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G05790 0.5kb upstream 0.5kb upstream 2768 true Chr2: 2198719-2201486 Arabidopsis thaliana
AT2G05790 0.5kb upstream 0.5kb upstream 500 false Chr2: 2198719-2199218 Arabidopsis thaliana
AT2G05790 0.5kb downstream 0.5kb downstream 2768 true Chr2: 2199219-2201986 Arabidopsis thaliana
AT2G05790 0.5kb downstream 0.5kb downstream 500 false Chr2: 2201487-2201986 Arabidopsis thaliana
AT2G05790 1.0kb upstream 1.0kb upstream 3268 true Chr2: 2198219-2201486 Arabidopsis thaliana
AT2G05790 1.0kb upstream 1.0kb upstream 1000 false Chr2: 2198219-2199218 Arabidopsis thaliana
AT2G05790 1.0kb downstream 1.0kb downstream 3268 true Chr2: 2199219-2202486 Arabidopsis thaliana
AT2G05790 1.0kb downstream 1.0kb downstream 1000 false Chr2: 2201487-2202486 Arabidopsis thaliana
AT2G05790 2.0kb upstream 2.0kb upstream 4268 true Chr2: 2197219-2201486 Arabidopsis thaliana
AT2G05790 2.0kb upstream 2.0kb upstream 2000 false Chr2: 2197219-2199218 Arabidopsis thaliana
AT2G05790 2.0kb downstream 2.0kb downstream 4268 true Chr2: 2199219-2203486 Arabidopsis thaliana
AT2G05790 2.0kb downstream 2.0kb downstream 2000 false Chr2: 2201487-2203486 Arabidopsis thaliana
AT2G05790 5.0kb upstream 5.0kb upstream 7268 true Chr2: 2194219-2201486 Arabidopsis thaliana
AT2G05790 5.0kb upstream 5.0kb upstream 5000 false Chr2: 2194219-2199218 Arabidopsis thaliana
AT2G05790 5.0kb downstream 5.0kb downstream 7268 true Chr2: 2199219-2206486 Arabidopsis thaliana
AT2G05790 5.0kb downstream 5.0kb downstream 5000 false Chr2: 2201487-2206486 Arabidopsis thaliana
AT2G05790 10.0kb upstream 10.0kb upstream 12268 true Chr2: 2189219-2201486 Arabidopsis thaliana
AT2G05790 10.0kb upstream 10.0kb upstream 10000 false Chr2: 2189219-2199218 Arabidopsis thaliana
AT2G05790 10.0kb downstream 10.0kb downstream 12268 true Chr2: 2199219-2211486 Arabidopsis thaliana
AT2G05790 10.0kb downstream 10.0kb downstream 10000 false Chr2: 2201487-2211486 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365702 5261 Brassicaceae View MSA
123834270 5264 Brassicales-Malvales View MSA
124338562 5266 SBM View MSA
124239311 5268 Malvidae View MSA
124066256 5270 Rosid View MSA
123739284 5271 Pentapetalae View MSA
122791436 5272 Eudicot View MSA
122044827 5273 Angiosperm View MSA
121351661 5274 Embryophyte View MSA
123382266 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.924     High  
cufflinks 77.376     High  
cufflinks 27.196     High Low
cufflinks 76.541     High  
cufflinks 28.595     High  
cufflinks 89.775     High High

0 Strain