Gene : AT2G15440 A. thaliana TAIR10
Defline:  (1 of 10) PF04669 - Polysaccharide biosynthesis (Polysacc_synt_4) Genomic Order:  794
Name:  ? AT2G15440 Secondary Identifier:  ? PAC:19638487
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G15440 0.5kb upstream 0.5kb upstream 1718 true Chr2: 6743613-6745330 Arabidopsis thaliana
AT2G15440 0.5kb upstream 0.5kb upstream 500 false Chr2: 6744831-6745330 Arabidopsis thaliana
AT2G15440 0.5kb downstream 0.5kb downstream 1718 true Chr2: 6743113-6744830 Arabidopsis thaliana
AT2G15440 0.5kb downstream 0.5kb downstream 500 false Chr2: 6743113-6743612 Arabidopsis thaliana
AT2G15440 1.0kb upstream 1.0kb upstream 2218 true Chr2: 6743613-6745830 Arabidopsis thaliana
AT2G15440 1.0kb upstream 1.0kb upstream 1000 false Chr2: 6744831-6745830 Arabidopsis thaliana
AT2G15440 1.0kb downstream 1.0kb downstream 2218 true Chr2: 6742613-6744830 Arabidopsis thaliana
AT2G15440 1.0kb downstream 1.0kb downstream 1000 false Chr2: 6742613-6743612 Arabidopsis thaliana
AT2G15440 2.0kb upstream 2.0kb upstream 3218 true Chr2: 6743613-6746830 Arabidopsis thaliana
AT2G15440 2.0kb upstream 2.0kb upstream 2000 false Chr2: 6744831-6746830 Arabidopsis thaliana
AT2G15440 2.0kb downstream 2.0kb downstream 3218 true Chr2: 6741613-6744830 Arabidopsis thaliana
AT2G15440 2.0kb downstream 2.0kb downstream 2000 false Chr2: 6741613-6743612 Arabidopsis thaliana
AT2G15440 5.0kb upstream 5.0kb upstream 6218 true Chr2: 6743613-6749830 Arabidopsis thaliana
AT2G15440 5.0kb upstream 5.0kb upstream 5000 false Chr2: 6744831-6749830 Arabidopsis thaliana
AT2G15440 5.0kb downstream 5.0kb downstream 6218 true Chr2: 6738613-6744830 Arabidopsis thaliana
AT2G15440 5.0kb downstream 5.0kb downstream 5000 false Chr2: 6738613-6743612 Arabidopsis thaliana
AT2G15440 10.0kb upstream 10.0kb upstream 11218 true Chr2: 6743613-6754830 Arabidopsis thaliana
AT2G15440 10.0kb upstream 10.0kb upstream 10000 false Chr2: 6744831-6754830 Arabidopsis thaliana
AT2G15440 10.0kb downstream 10.0kb downstream 11218 true Chr2: 6733613-6744830 Arabidopsis thaliana
AT2G15440 10.0kb downstream 10.0kb downstream 10000 false Chr2: 6733613-6743612 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365107 5261 Brassicaceae View MSA
123827441 5264 Brassicales-Malvales View MSA
124321464 5266 SBM View MSA
124246735 5268 Malvidae View MSA
124073166 5270 Rosid View MSA
123750193 5271 Pentapetalae View MSA
122793595 5272 Eudicot View MSA
122042282 5273 Angiosperm View MSA
121349069 5274 Embryophyte View MSA
123381149 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.473        
cufflinks 10.891        
cufflinks 1.037        
cufflinks 8.778        
cufflinks 0.595       Low
cufflinks 12.61       High

0 Strain