Gene : AT2G27360 A. thaliana TAIR10
Defline:  (1 of 14) 3.1.1.49 - Sinapine esterase Genomic Order:  2022
Name:  ? AT2G27360 Secondary Identifier:  ? PAC:19642318
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3301 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G27360 0.5kb upstream 0.5kb upstream 2368 true Chr2: 11705698-11708065 Arabidopsis thaliana
AT2G27360 0.5kb upstream 0.5kb upstream 500 false Chr2: 11705698-11706197 Arabidopsis thaliana
AT2G27360 0.5kb downstream 0.5kb downstream 2368 true Chr2: 11706198-11708565 Arabidopsis thaliana
AT2G27360 0.5kb downstream 0.5kb downstream 500 false Chr2: 11708066-11708565 Arabidopsis thaliana
AT2G27360 1.0kb upstream 1.0kb upstream 2868 true Chr2: 11705198-11708065 Arabidopsis thaliana
AT2G27360 1.0kb upstream 1.0kb upstream 1000 false Chr2: 11705198-11706197 Arabidopsis thaliana
AT2G27360 1.0kb downstream 1.0kb downstream 2868 true Chr2: 11706198-11709065 Arabidopsis thaliana
AT2G27360 1.0kb downstream 1.0kb downstream 1000 false Chr2: 11708066-11709065 Arabidopsis thaliana
AT2G27360 2.0kb upstream 2.0kb upstream 3868 true Chr2: 11704198-11708065 Arabidopsis thaliana
AT2G27360 2.0kb upstream 2.0kb upstream 2000 false Chr2: 11704198-11706197 Arabidopsis thaliana
AT2G27360 2.0kb downstream 2.0kb downstream 3868 true Chr2: 11706198-11710065 Arabidopsis thaliana
AT2G27360 2.0kb downstream 2.0kb downstream 2000 false Chr2: 11708066-11710065 Arabidopsis thaliana
AT2G27360 5.0kb upstream 5.0kb upstream 6868 true Chr2: 11701198-11708065 Arabidopsis thaliana
AT2G27360 5.0kb upstream 5.0kb upstream 5000 false Chr2: 11701198-11706197 Arabidopsis thaliana
AT2G27360 5.0kb downstream 5.0kb downstream 6868 true Chr2: 11706198-11713065 Arabidopsis thaliana
AT2G27360 5.0kb downstream 5.0kb downstream 5000 false Chr2: 11708066-11713065 Arabidopsis thaliana
AT2G27360 10.0kb upstream 10.0kb upstream 11868 true Chr2: 11696198-11708065 Arabidopsis thaliana
AT2G27360 10.0kb upstream 10.0kb upstream 10000 false Chr2: 11696198-11706197 Arabidopsis thaliana
AT2G27360 10.0kb downstream 10.0kb downstream 11868 true Chr2: 11706198-11718065 Arabidopsis thaliana
AT2G27360 10.0kb downstream 10.0kb downstream 10000 false Chr2: 11708066-11718065 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338503 5261 Brassicaceae View MSA
123779073 5264 Brassicales-Malvales View MSA
124277406 5266 SBM View MSA
124132612 5268 Malvidae View MSA
124068482 5270 Rosid View MSA
123752448 5271 Pentapetalae View MSA
122797509 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.832        
cufflinks 2.428       Low
cufflinks 2.785        
cufflinks 2.907        
cufflinks 3.677       High
cufflinks 2.781        

0 Strain