Gene : AT2G28490 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31189//PTHR31189:SF2 - FAMILY NOT NAMED // CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  2138
Name:  ? AT2G28490 Secondary Identifier:  ? PAC:19643355
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G28490 0.5kb upstream 0.5kb upstream 2916 true Chr2: 12178597-12181512 Arabidopsis thaliana
AT2G28490 0.5kb upstream 0.5kb upstream 500 false Chr2: 12181013-12181512 Arabidopsis thaliana
AT2G28490 0.5kb downstream 0.5kb downstream 2916 true Chr2: 12178097-12181012 Arabidopsis thaliana
AT2G28490 0.5kb downstream 0.5kb downstream 500 false Chr2: 12178097-12178596 Arabidopsis thaliana
AT2G28490 1.0kb upstream 1.0kb upstream 3416 true Chr2: 12178597-12182012 Arabidopsis thaliana
AT2G28490 1.0kb upstream 1.0kb upstream 1000 false Chr2: 12181013-12182012 Arabidopsis thaliana
AT2G28490 1.0kb downstream 1.0kb downstream 3416 true Chr2: 12177597-12181012 Arabidopsis thaliana
AT2G28490 1.0kb downstream 1.0kb downstream 1000 false Chr2: 12177597-12178596 Arabidopsis thaliana
AT2G28490 2.0kb upstream 2.0kb upstream 4416 true Chr2: 12178597-12183012 Arabidopsis thaliana
AT2G28490 2.0kb upstream 2.0kb upstream 2000 false Chr2: 12181013-12183012 Arabidopsis thaliana
AT2G28490 2.0kb downstream 2.0kb downstream 4416 true Chr2: 12176597-12181012 Arabidopsis thaliana
AT2G28490 2.0kb downstream 2.0kb downstream 2000 false Chr2: 12176597-12178596 Arabidopsis thaliana
AT2G28490 5.0kb upstream 5.0kb upstream 7416 true Chr2: 12178597-12186012 Arabidopsis thaliana
AT2G28490 5.0kb upstream 5.0kb upstream 5000 false Chr2: 12181013-12186012 Arabidopsis thaliana
AT2G28490 5.0kb downstream 5.0kb downstream 7416 true Chr2: 12173597-12181012 Arabidopsis thaliana
AT2G28490 5.0kb downstream 5.0kb downstream 5000 false Chr2: 12173597-12178596 Arabidopsis thaliana
AT2G28490 10.0kb upstream 10.0kb upstream 12416 true Chr2: 12178597-12191012 Arabidopsis thaliana
AT2G28490 10.0kb upstream 10.0kb upstream 10000 false Chr2: 12181013-12191012 Arabidopsis thaliana
AT2G28490 10.0kb downstream 10.0kb downstream 12416 true Chr2: 12168597-12181012 Arabidopsis thaliana
AT2G28490 10.0kb downstream 10.0kb downstream 10000 false Chr2: 12168597-12178596 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372514 5261 Brassicaceae View MSA
123832835 5264 Brassicales-Malvales View MSA
124342856 5266 SBM View MSA
124239817 5268 Malvidae View MSA
124068702 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain