Gene : AT2G39410 A. thaliana TAIR10
Defline:  (1 of 2) PF12146//PF12695 - Serine aminopeptidase, S33 (Hydrolase_4) // Alpha/beta hydrolase family (Abhydrolase_5) Genomic Order:  3306
Name:  ? AT2G39410 Secondary Identifier:  ? PAC:19641427
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7420 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G39410 0.5kb upstream 0.5kb upstream 3149 true Chr2: 16455069-16458217 Arabidopsis thaliana
AT2G39410 0.5kb upstream 0.5kb upstream 500 false Chr2: 16455069-16455568 Arabidopsis thaliana
AT2G39410 0.5kb downstream 0.5kb downstream 3149 true Chr2: 16455569-16458717 Arabidopsis thaliana
AT2G39410 0.5kb downstream 0.5kb downstream 500 false Chr2: 16458218-16458717 Arabidopsis thaliana
AT2G39410 1.0kb upstream 1.0kb upstream 3649 true Chr2: 16454569-16458217 Arabidopsis thaliana
AT2G39410 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16454569-16455568 Arabidopsis thaliana
AT2G39410 1.0kb downstream 1.0kb downstream 3649 true Chr2: 16455569-16459217 Arabidopsis thaliana
AT2G39410 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16458218-16459217 Arabidopsis thaliana
AT2G39410 2.0kb upstream 2.0kb upstream 4649 true Chr2: 16453569-16458217 Arabidopsis thaliana
AT2G39410 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16453569-16455568 Arabidopsis thaliana
AT2G39410 2.0kb downstream 2.0kb downstream 4649 true Chr2: 16455569-16460217 Arabidopsis thaliana
AT2G39410 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16458218-16460217 Arabidopsis thaliana
AT2G39410 5.0kb upstream 5.0kb upstream 7649 true Chr2: 16450569-16458217 Arabidopsis thaliana
AT2G39410 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16450569-16455568 Arabidopsis thaliana
AT2G39410 5.0kb downstream 5.0kb downstream 7649 true Chr2: 16455569-16463217 Arabidopsis thaliana
AT2G39410 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16458218-16463217 Arabidopsis thaliana
AT2G39410 10.0kb upstream 10.0kb upstream 12649 true Chr2: 16445569-16458217 Arabidopsis thaliana
AT2G39410 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16445569-16455568 Arabidopsis thaliana
AT2G39410 10.0kb downstream 10.0kb downstream 12649 true Chr2: 16455569-16468217 Arabidopsis thaliana
AT2G39410 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16458218-16468217 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374128 5261 Brassicaceae View MSA
123800686 5264 Brassicales-Malvales View MSA
124350736 5266 SBM View MSA
124253573 5268 Malvidae View MSA
124061404 5270 Rosid View MSA
123753493 5271 Pentapetalae View MSA
122796454 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.122     Low  
cufflinks 4.021        
cufflinks 0.066     Low Low
cufflinks 3.491        
cufflinks 0.083     Low  
cufflinks 3.136        

0 Strain