Gene : AT2G46100 A. thaliana TAIR10
Defline:  (1 of 7) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358) Genomic Order:  4028
Name:  ? AT2G46100 Secondary Identifier:  ? PAC:19641789
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46100 0.5kb upstream 0.5kb upstream 1840 true Chr2: 18952780-18954619 Arabidopsis thaliana
AT2G46100 0.5kb upstream 0.5kb upstream 500 false Chr2: 18952780-18953279 Arabidopsis thaliana
AT2G46100 0.5kb downstream 0.5kb downstream 1840 true Chr2: 18953280-18955119 Arabidopsis thaliana
AT2G46100 0.5kb downstream 0.5kb downstream 500 false Chr2: 18954620-18955119 Arabidopsis thaliana
AT2G46100 1.0kb upstream 1.0kb upstream 2340 true Chr2: 18952280-18954619 Arabidopsis thaliana
AT2G46100 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18952280-18953279 Arabidopsis thaliana
AT2G46100 1.0kb downstream 1.0kb downstream 2340 true Chr2: 18953280-18955619 Arabidopsis thaliana
AT2G46100 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18954620-18955619 Arabidopsis thaliana
AT2G46100 2.0kb upstream 2.0kb upstream 3340 true Chr2: 18951280-18954619 Arabidopsis thaliana
AT2G46100 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18951280-18953279 Arabidopsis thaliana
AT2G46100 2.0kb downstream 2.0kb downstream 3340 true Chr2: 18953280-18956619 Arabidopsis thaliana
AT2G46100 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18954620-18956619 Arabidopsis thaliana
AT2G46100 5.0kb upstream 5.0kb upstream 6340 true Chr2: 18948280-18954619 Arabidopsis thaliana
AT2G46100 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18948280-18953279 Arabidopsis thaliana
AT2G46100 5.0kb downstream 5.0kb downstream 6340 true Chr2: 18953280-18959619 Arabidopsis thaliana
AT2G46100 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18954620-18959619 Arabidopsis thaliana
AT2G46100 10.0kb upstream 10.0kb upstream 11340 true Chr2: 18943280-18954619 Arabidopsis thaliana
AT2G46100 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18943280-18953279 Arabidopsis thaliana
AT2G46100 10.0kb downstream 10.0kb downstream 11340 true Chr2: 18953280-18964619 Arabidopsis thaliana
AT2G46100 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18954620-18964619 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368219 5261 Brassicaceae View MSA
123834724 5264 Brassicales-Malvales View MSA
124343032 5266 SBM View MSA
124237862 5268 Malvidae View MSA
124064038 5270 Rosid View MSA
123740310 5271 Pentapetalae View MSA
122788150 5272 Eudicot View MSA
122044310 5273 Angiosperm View MSA
121347374 5274 Embryophyte View MSA
123427287 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.671        
cufflinks 11.359        
cufflinks 21.015        
cufflinks 12.846        
cufflinks 24.084        
cufflinks 6.601       Low

0 Strain