Gene : AT2G44040 A. thaliana TAIR10
Defline:  (1 of 2) 1.17.1.8//1.3.1.26 - 4-hydroxy-tetrahydrodipicolinate reductase / Dihydrodipicolinate reductase // Transferred entry: 1.17.1.8 Genomic Order:  3815
Name:  ? AT2G44040 Secondary Identifier:  ? PAC:19642463
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5097 Arabidopsis thaliana pathologic  
Athaliana PWY-724 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G44040 0.5kb upstream 0.5kb upstream 2836 true Chr2: 18221769-18224604 Arabidopsis thaliana
AT2G44040 0.5kb upstream 0.5kb upstream 500 false Chr2: 18224105-18224604 Arabidopsis thaliana
AT2G44040 0.5kb downstream 0.5kb downstream 2836 true Chr2: 18221269-18224104 Arabidopsis thaliana
AT2G44040 0.5kb downstream 0.5kb downstream 500 false Chr2: 18221269-18221768 Arabidopsis thaliana
AT2G44040 1.0kb upstream 1.0kb upstream 3336 true Chr2: 18221769-18225104 Arabidopsis thaliana
AT2G44040 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18224105-18225104 Arabidopsis thaliana
AT2G44040 1.0kb downstream 1.0kb downstream 3336 true Chr2: 18220769-18224104 Arabidopsis thaliana
AT2G44040 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18220769-18221768 Arabidopsis thaliana
AT2G44040 2.0kb upstream 2.0kb upstream 4336 true Chr2: 18221769-18226104 Arabidopsis thaliana
AT2G44040 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18224105-18226104 Arabidopsis thaliana
AT2G44040 2.0kb downstream 2.0kb downstream 4336 true Chr2: 18219769-18224104 Arabidopsis thaliana
AT2G44040 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18219769-18221768 Arabidopsis thaliana
AT2G44040 5.0kb upstream 5.0kb upstream 7336 true Chr2: 18221769-18229104 Arabidopsis thaliana
AT2G44040 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18224105-18229104 Arabidopsis thaliana
AT2G44040 5.0kb downstream 5.0kb downstream 7336 true Chr2: 18216769-18224104 Arabidopsis thaliana
AT2G44040 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18216769-18221768 Arabidopsis thaliana
AT2G44040 10.0kb upstream 10.0kb upstream 12336 true Chr2: 18221769-18234104 Arabidopsis thaliana
AT2G44040 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18224105-18234104 Arabidopsis thaliana
AT2G44040 10.0kb downstream 10.0kb downstream 12336 true Chr2: 18211769-18224104 Arabidopsis thaliana
AT2G44040 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18211769-18221768 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362484 5261 Brassicaceae View MSA
123835164 5264 Brassicales-Malvales View MSA
124339702 5266 SBM View MSA
124251630 5268 Malvidae View MSA
124061007 5270 Rosid View MSA
123740937 5271 Pentapetalae View MSA
122785919 5272 Eudicot View MSA
122046782 5273 Angiosperm View MSA
121345687 5274 Embryophyte View MSA
123424298 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.824        
cufflinks 3.913       Low
cufflinks 14.628       High
cufflinks 4.407        
cufflinks 10.787        
cufflinks 4.597        

0 Strain