Gene : SCPL12 A. thaliana TAIR10
Primary Identifier:  ? AT2G22920 Defline:  (1 of 3) 2.3.1.92 - Sinapoylglucose--malate O-sinapoyltransferase
Genomic Order:  1554 Name:  ? AT2G22920
Secondary Identifier:  ? PAC:19640348
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3301 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G22920 0.5kb upstream 0.5kb upstream 4470 true Chr2: 9753131-9757600 Arabidopsis thaliana
AT2G22920 0.5kb upstream 0.5kb upstream 500 false Chr2: 9753131-9753630 Arabidopsis thaliana
AT2G22920 0.5kb downstream 0.5kb downstream 4470 true Chr2: 9753631-9758100 Arabidopsis thaliana
AT2G22920 0.5kb downstream 0.5kb downstream 500 false Chr2: 9757601-9758100 Arabidopsis thaliana
AT2G22920 1.0kb upstream 1.0kb upstream 4970 true Chr2: 9752631-9757600 Arabidopsis thaliana
AT2G22920 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9752631-9753630 Arabidopsis thaliana
AT2G22920 1.0kb downstream 1.0kb downstream 4970 true Chr2: 9753631-9758600 Arabidopsis thaliana
AT2G22920 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9757601-9758600 Arabidopsis thaliana
AT2G22920 2.0kb upstream 2.0kb upstream 5970 true Chr2: 9751631-9757600 Arabidopsis thaliana
AT2G22920 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9751631-9753630 Arabidopsis thaliana
AT2G22920 2.0kb downstream 2.0kb downstream 5970 true Chr2: 9753631-9759600 Arabidopsis thaliana
AT2G22920 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9757601-9759600 Arabidopsis thaliana
AT2G22920 5.0kb upstream 5.0kb upstream 8970 true Chr2: 9748631-9757600 Arabidopsis thaliana
AT2G22920 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9748631-9753630 Arabidopsis thaliana
AT2G22920 5.0kb downstream 5.0kb downstream 8970 true Chr2: 9753631-9762600 Arabidopsis thaliana
AT2G22920 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9757601-9762600 Arabidopsis thaliana
AT2G22920 10.0kb upstream 10.0kb upstream 13970 true Chr2: 9743631-9757600 Arabidopsis thaliana
AT2G22920 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9743631-9753630 Arabidopsis thaliana
AT2G22920 10.0kb downstream 10.0kb downstream 13970 true Chr2: 9753631-9767600 Arabidopsis thaliana
AT2G22920 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9757601-9767600 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380420 5261 Brassicaceae View MSA
123841552 5264 Brassicales-Malvales View MSA
124347801 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.096     Low  
cufflinks 9.374        
cufflinks 0.114     Low  
cufflinks 8.472        
cufflinks 0.105     Low  
cufflinks 7.573        

0 Strain