Gene : AT2G03870 A. thaliana TAIR10
Defline:  (1 of 1) K12626 - U6 snRNA-associated Sm-like protein LSm7 (LSM7) Genomic Order:  280
Name:  ? AT2G03870 Secondary Identifier:  ? PAC:19640056
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G03870 0.5kb upstream 0.5kb upstream 1954 true Chr2: 1179484-1181437 Arabidopsis thaliana
AT2G03870 0.5kb upstream 0.5kb upstream 500 false Chr2: 1179484-1179983 Arabidopsis thaliana
AT2G03870 0.5kb downstream 0.5kb downstream 1954 true Chr2: 1179984-1181937 Arabidopsis thaliana
AT2G03870 0.5kb downstream 0.5kb downstream 500 false Chr2: 1181438-1181937 Arabidopsis thaliana
AT2G03870 1.0kb upstream 1.0kb upstream 2454 true Chr2: 1178984-1181437 Arabidopsis thaliana
AT2G03870 1.0kb upstream 1.0kb upstream 1000 false Chr2: 1178984-1179983 Arabidopsis thaliana
AT2G03870 1.0kb downstream 1.0kb downstream 2454 true Chr2: 1179984-1182437 Arabidopsis thaliana
AT2G03870 1.0kb downstream 1.0kb downstream 1000 false Chr2: 1181438-1182437 Arabidopsis thaliana
AT2G03870 2.0kb upstream 2.0kb upstream 3454 true Chr2: 1177984-1181437 Arabidopsis thaliana
AT2G03870 2.0kb upstream 2.0kb upstream 2000 false Chr2: 1177984-1179983 Arabidopsis thaliana
AT2G03870 2.0kb downstream 2.0kb downstream 3454 true Chr2: 1179984-1183437 Arabidopsis thaliana
AT2G03870 2.0kb downstream 2.0kb downstream 2000 false Chr2: 1181438-1183437 Arabidopsis thaliana
AT2G03870 5.0kb upstream 5.0kb upstream 6454 true Chr2: 1174984-1181437 Arabidopsis thaliana
AT2G03870 5.0kb upstream 5.0kb upstream 5000 false Chr2: 1174984-1179983 Arabidopsis thaliana
AT2G03870 5.0kb downstream 5.0kb downstream 6454 true Chr2: 1179984-1186437 Arabidopsis thaliana
AT2G03870 5.0kb downstream 5.0kb downstream 5000 false Chr2: 1181438-1186437 Arabidopsis thaliana
AT2G03870 10.0kb upstream 10.0kb upstream 11454 true Chr2: 1169984-1181437 Arabidopsis thaliana
AT2G03870 10.0kb upstream 10.0kb upstream 10000 false Chr2: 1169984-1179983 Arabidopsis thaliana
AT2G03870 10.0kb downstream 10.0kb downstream 11454 true Chr2: 1179984-1191437 Arabidopsis thaliana
AT2G03870 10.0kb downstream 10.0kb downstream 10000 false Chr2: 1181438-1191437 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370917 5261 Brassicaceae View MSA
123830302 5264 Brassicales-Malvales View MSA
124337538 5266 SBM View MSA
124241268 5268 Malvidae View MSA
124062559 5270 Rosid View MSA
123737808 5271 Pentapetalae View MSA
122791526 5272 Eudicot View MSA
122051368 5273 Angiosperm View MSA
121349484 5274 Embryophyte View MSA
123423999 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.639        
cufflinks 11.345        
cufflinks 9.407       Low
cufflinks 11.997       High
cufflinks 9.252       Low
cufflinks 11.673        

0 Strain