Gene : AT1G72730 A. thaliana TAIR10
Defline:  (1 of 3) K03257 - translation initiation factor 4A (EIF4A) Genomic Order:  6232
Name:  ? AT1G72730 Secondary Identifier:  ? PAC:19649247
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72730 0.5kb upstream 0.5kb upstream 2885 true Chr1: 27377798-27380682 Arabidopsis thaliana
AT1G72730 0.5kb upstream 0.5kb upstream 500 false Chr1: 27380183-27380682 Arabidopsis thaliana
AT1G72730 0.5kb downstream 0.5kb downstream 2885 true Chr1: 27377298-27380182 Arabidopsis thaliana
AT1G72730 0.5kb downstream 0.5kb downstream 500 false Chr1: 27377298-27377797 Arabidopsis thaliana
AT1G72730 1.0kb upstream 1.0kb upstream 3385 true Chr1: 27377798-27381182 Arabidopsis thaliana
AT1G72730 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27380183-27381182 Arabidopsis thaliana
AT1G72730 1.0kb downstream 1.0kb downstream 3385 true Chr1: 27376798-27380182 Arabidopsis thaliana
AT1G72730 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27376798-27377797 Arabidopsis thaliana
AT1G72730 2.0kb upstream 2.0kb upstream 4385 true Chr1: 27377798-27382182 Arabidopsis thaliana
AT1G72730 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27380183-27382182 Arabidopsis thaliana
AT1G72730 2.0kb downstream 2.0kb downstream 4385 true Chr1: 27375798-27380182 Arabidopsis thaliana
AT1G72730 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27375798-27377797 Arabidopsis thaliana
AT1G72730 5.0kb upstream 5.0kb upstream 7385 true Chr1: 27377798-27385182 Arabidopsis thaliana
AT1G72730 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27380183-27385182 Arabidopsis thaliana
AT1G72730 5.0kb downstream 5.0kb downstream 7385 true Chr1: 27372798-27380182 Arabidopsis thaliana
AT1G72730 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27372798-27377797 Arabidopsis thaliana
AT1G72730 10.0kb upstream 10.0kb upstream 12385 true Chr1: 27377798-27390182 Arabidopsis thaliana
AT1G72730 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27380183-27390182 Arabidopsis thaliana
AT1G72730 10.0kb downstream 10.0kb downstream 12385 true Chr1: 27367798-27380182 Arabidopsis thaliana
AT1G72730 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27367798-27377797 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368704 5261 Brassicaceae View MSA
123836661 5264 Brassicales-Malvales View MSA
124322192 5266 SBM View MSA
124169097 5268 Malvidae View MSA
123892258 5270 Rosid View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.082        
cufflinks 12.039        
cufflinks 4.034        
cufflinks 14.108        
cufflinks 3.462       Low
cufflinks 16.688       High

0 Strain