Gene : AT1G23280 A. thaliana TAIR10
Defline:  (1 of 1) K14831 - protein MAK16 (MAK16) Genomic Order:  2362
Name:  ? AT1G23280 Secondary Identifier:  ? PAC:19657872
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23280 0.5kb upstream 0.5kb upstream 2408 true Chr1: 8260865-8263272 Arabidopsis thaliana
AT1G23280 0.5kb upstream 0.5kb upstream 500 false Chr1: 8262773-8263272 Arabidopsis thaliana
AT1G23280 0.5kb downstream 0.5kb downstream 2408 true Chr1: 8260365-8262772 Arabidopsis thaliana
AT1G23280 0.5kb downstream 0.5kb downstream 500 false Chr1: 8260365-8260864 Arabidopsis thaliana
AT1G23280 1.0kb upstream 1.0kb upstream 2908 true Chr1: 8260865-8263772 Arabidopsis thaliana
AT1G23280 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8262773-8263772 Arabidopsis thaliana
AT1G23280 1.0kb downstream 1.0kb downstream 2908 true Chr1: 8259865-8262772 Arabidopsis thaliana
AT1G23280 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8259865-8260864 Arabidopsis thaliana
AT1G23280 2.0kb upstream 2.0kb upstream 3908 true Chr1: 8260865-8264772 Arabidopsis thaliana
AT1G23280 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8262773-8264772 Arabidopsis thaliana
AT1G23280 2.0kb downstream 2.0kb downstream 3908 true Chr1: 8258865-8262772 Arabidopsis thaliana
AT1G23280 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8258865-8260864 Arabidopsis thaliana
AT1G23280 5.0kb upstream 5.0kb upstream 6908 true Chr1: 8260865-8267772 Arabidopsis thaliana
AT1G23280 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8262773-8267772 Arabidopsis thaliana
AT1G23280 5.0kb downstream 5.0kb downstream 6908 true Chr1: 8255865-8262772 Arabidopsis thaliana
AT1G23280 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8255865-8260864 Arabidopsis thaliana
AT1G23280 10.0kb upstream 10.0kb upstream 11908 true Chr1: 8260865-8272772 Arabidopsis thaliana
AT1G23280 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8262773-8272772 Arabidopsis thaliana
AT1G23280 10.0kb downstream 10.0kb downstream 11908 true Chr1: 8250865-8262772 Arabidopsis thaliana
AT1G23280 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8250865-8260864 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374418 5261 Brassicaceae View MSA
123830027 5264 Brassicales-Malvales View MSA
124339871 5266 SBM View MSA
124244011 5268 Malvidae View MSA
124061787 5270 Rosid View MSA
123739269 5271 Pentapetalae View MSA
122788888 5272 Eudicot View MSA
122042621 5273 Angiosperm View MSA
121345777 5274 Embryophyte View MSA
123426368 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.213        
cufflinks 15.502        
cufflinks 15.607        
cufflinks 17.421        
cufflinks 11.482       Low
cufflinks 18.458       High

0 Strain