Gene : AT1G50450 A. thaliana TAIR10
Defline:  (1 of 1) 1.5.1.43 - Carboxynorspermidine synthase / Carboxyspermidine dehydrogenase Genomic Order:  4067
Name:  ? AT1G50450 Secondary Identifier:  ? PAC:19650027
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50450 0.5kb upstream 0.5kb upstream 3087 true Chr1: 18687785-18690871 Arabidopsis thaliana
AT1G50450 0.5kb upstream 0.5kb upstream 500 false Chr1: 18690372-18690871 Arabidopsis thaliana
AT1G50450 0.5kb downstream 0.5kb downstream 3087 true Chr1: 18687285-18690371 Arabidopsis thaliana
AT1G50450 0.5kb downstream 0.5kb downstream 500 false Chr1: 18687285-18687784 Arabidopsis thaliana
AT1G50450 1.0kb upstream 1.0kb upstream 3587 true Chr1: 18687785-18691371 Arabidopsis thaliana
AT1G50450 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18690372-18691371 Arabidopsis thaliana
AT1G50450 1.0kb downstream 1.0kb downstream 3587 true Chr1: 18686785-18690371 Arabidopsis thaliana
AT1G50450 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18686785-18687784 Arabidopsis thaliana
AT1G50450 2.0kb upstream 2.0kb upstream 4587 true Chr1: 18687785-18692371 Arabidopsis thaliana
AT1G50450 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18690372-18692371 Arabidopsis thaliana
AT1G50450 2.0kb downstream 2.0kb downstream 4587 true Chr1: 18685785-18690371 Arabidopsis thaliana
AT1G50450 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18685785-18687784 Arabidopsis thaliana
AT1G50450 5.0kb upstream 5.0kb upstream 7587 true Chr1: 18687785-18695371 Arabidopsis thaliana
AT1G50450 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18690372-18695371 Arabidopsis thaliana
AT1G50450 5.0kb downstream 5.0kb downstream 7587 true Chr1: 18682785-18690371 Arabidopsis thaliana
AT1G50450 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18682785-18687784 Arabidopsis thaliana
AT1G50450 10.0kb upstream 10.0kb upstream 12587 true Chr1: 18687785-18700371 Arabidopsis thaliana
AT1G50450 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18690372-18700371 Arabidopsis thaliana
AT1G50450 10.0kb downstream 10.0kb downstream 12587 true Chr1: 18677785-18690371 Arabidopsis thaliana
AT1G50450 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18677785-18687784 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371104 5261 Brassicaceae View MSA
123828321 5264 Brassicales-Malvales View MSA
124345882 5266 SBM View MSA
124239236 5268 Malvidae View MSA
124065945 5270 Rosid View MSA
123752948 5271 Pentapetalae View MSA
122790267 5272 Eudicot View MSA
122051589 5273 Angiosperm View MSA
121345153 5274 Embryophyte View MSA
123426869 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.837        
cufflinks 1.372        
cufflinks 24.701        
cufflinks 1.356        
cufflinks 21.847        
cufflinks 1.099       Low

0 Strain