Gene : AT1G52930 A. thaliana TAIR10
Defline:  (1 of 2) K14820 - ribosome biogenesis protein BRX1 (BRX1, BRIX1) Genomic Order:  4327
Name:  ? AT1G52930 Secondary Identifier:  ? PAC:19652918
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G52930 0.5kb upstream 0.5kb upstream 2494 true Chr1: 19710737-19713230 Arabidopsis thaliana
AT1G52930 0.5kb upstream 0.5kb upstream 500 false Chr1: 19710737-19711236 Arabidopsis thaliana
AT1G52930 0.5kb downstream 0.5kb downstream 2494 true Chr1: 19711237-19713730 Arabidopsis thaliana
AT1G52930 0.5kb downstream 0.5kb downstream 500 false Chr1: 19713231-19713730 Arabidopsis thaliana
AT1G52930 1.0kb upstream 1.0kb upstream 2994 true Chr1: 19710237-19713230 Arabidopsis thaliana
AT1G52930 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19710237-19711236 Arabidopsis thaliana
AT1G52930 1.0kb downstream 1.0kb downstream 2994 true Chr1: 19711237-19714230 Arabidopsis thaliana
AT1G52930 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19713231-19714230 Arabidopsis thaliana
AT1G52930 2.0kb upstream 2.0kb upstream 3994 true Chr1: 19709237-19713230 Arabidopsis thaliana
AT1G52930 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19709237-19711236 Arabidopsis thaliana
AT1G52930 2.0kb downstream 2.0kb downstream 3994 true Chr1: 19711237-19715230 Arabidopsis thaliana
AT1G52930 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19713231-19715230 Arabidopsis thaliana
AT1G52930 5.0kb upstream 5.0kb upstream 6994 true Chr1: 19706237-19713230 Arabidopsis thaliana
AT1G52930 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19706237-19711236 Arabidopsis thaliana
AT1G52930 5.0kb downstream 5.0kb downstream 6994 true Chr1: 19711237-19718230 Arabidopsis thaliana
AT1G52930 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19713231-19718230 Arabidopsis thaliana
AT1G52930 10.0kb upstream 10.0kb upstream 11994 true Chr1: 19701237-19713230 Arabidopsis thaliana
AT1G52930 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19701237-19711236 Arabidopsis thaliana
AT1G52930 10.0kb downstream 10.0kb downstream 11994 true Chr1: 19711237-19723230 Arabidopsis thaliana
AT1G52930 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19713231-19723230 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380176 5261 Brassicaceae View MSA
123834611 5264 Brassicales-Malvales View MSA
124343923 5266 SBM View MSA
124238393 5268 Malvidae View MSA
124066566 5270 Rosid View MSA
123743226 5271 Pentapetalae View MSA
122791953 5272 Eudicot View MSA
122044943 5273 Angiosperm View MSA
121349152 5274 Embryophyte View MSA
123424371 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.602        
cufflinks 17.668        
cufflinks 10.71        
cufflinks 19.851        
cufflinks 7.68       Low
cufflinks 23.039       High

0 Strain