Gene : MSRB1 A. thaliana TAIR10
Primary Identifier:  ? AT1G53670 Defline:  (1 of 1) PTHR10173//PTHR10173:SF38 - METHIONINE SULFOXIDE REDUCTASE // PEPTIDE METHIONINE SULFOXIDE REDUCTASE B1, CHLOROPLASTIC
Genomic Order:  4414 Name:  ? AT1G53670
Secondary Identifier:  ? PAC:19654831
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G53670 0.5kb upstream 0.5kb upstream 2079 true Chr1: 20036141-20038219 Arabidopsis thaliana
AT1G53670 0.5kb upstream 0.5kb upstream 500 false Chr1: 20036141-20036640 Arabidopsis thaliana
AT1G53670 0.5kb downstream 0.5kb downstream 2079 true Chr1: 20036641-20038719 Arabidopsis thaliana
AT1G53670 0.5kb downstream 0.5kb downstream 500 false Chr1: 20038220-20038719 Arabidopsis thaliana
AT1G53670 1.0kb upstream 1.0kb upstream 2579 true Chr1: 20035641-20038219 Arabidopsis thaliana
AT1G53670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20035641-20036640 Arabidopsis thaliana
AT1G53670 1.0kb downstream 1.0kb downstream 2579 true Chr1: 20036641-20039219 Arabidopsis thaliana
AT1G53670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20038220-20039219 Arabidopsis thaliana
AT1G53670 2.0kb upstream 2.0kb upstream 3579 true Chr1: 20034641-20038219 Arabidopsis thaliana
AT1G53670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20034641-20036640 Arabidopsis thaliana
AT1G53670 2.0kb downstream 2.0kb downstream 3579 true Chr1: 20036641-20040219 Arabidopsis thaliana
AT1G53670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20038220-20040219 Arabidopsis thaliana
AT1G53670 5.0kb upstream 5.0kb upstream 6579 true Chr1: 20031641-20038219 Arabidopsis thaliana
AT1G53670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20031641-20036640 Arabidopsis thaliana
AT1G53670 5.0kb downstream 5.0kb downstream 6579 true Chr1: 20036641-20043219 Arabidopsis thaliana
AT1G53670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20038220-20043219 Arabidopsis thaliana
AT1G53670 10.0kb upstream 10.0kb upstream 11579 true Chr1: 20026641-20038219 Arabidopsis thaliana
AT1G53670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20026641-20036640 Arabidopsis thaliana
AT1G53670 10.0kb downstream 10.0kb downstream 11579 true Chr1: 20036641-20048219 Arabidopsis thaliana
AT1G53670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20038220-20048219 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371379 5261 Brassicaceae View MSA
123838752 5264 Brassicales-Malvales View MSA
124337214 5266 SBM View MSA
124239253 5268 Malvidae View MSA
124067665 5270 Rosid View MSA
123746660 5271 Pentapetalae View MSA
122792336 5272 Eudicot View MSA
122047974 5273 Angiosperm View MSA
121348855 5274 Embryophyte View MSA
123426618 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.755        
cufflinks 2.378        
cufflinks 30.076     High High
cufflinks 2.993        
cufflinks 29.398     High High
cufflinks 1.93       Low

0 Strain