Gene : NF-YA7 A. thaliana TAIR10
Primary Identifier:  ? AT1G30500 Defline:  (1 of 10) K08064 - nuclear transcription factor Y, alpha (NFYA)
Genomic Order:  3016 Name:  ? AT1G30500
Secondary Identifier:  ? PAC:19654785
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G30500 0.5kb upstream 0.5kb upstream 2370 true Chr1: 10804450-10806819 Arabidopsis thaliana
AT1G30500 0.5kb upstream 0.5kb upstream 500 false Chr1: 10806320-10806819 Arabidopsis thaliana
AT1G30500 0.5kb downstream 0.5kb downstream 2370 true Chr1: 10803950-10806319 Arabidopsis thaliana
AT1G30500 0.5kb downstream 0.5kb downstream 500 false Chr1: 10803950-10804449 Arabidopsis thaliana
AT1G30500 1.0kb upstream 1.0kb upstream 2870 true Chr1: 10804450-10807319 Arabidopsis thaliana
AT1G30500 1.0kb upstream 1.0kb upstream 1000 false Chr1: 10806320-10807319 Arabidopsis thaliana
AT1G30500 1.0kb downstream 1.0kb downstream 2870 true Chr1: 10803450-10806319 Arabidopsis thaliana
AT1G30500 1.0kb downstream 1.0kb downstream 1000 false Chr1: 10803450-10804449 Arabidopsis thaliana
AT1G30500 2.0kb upstream 2.0kb upstream 3870 true Chr1: 10804450-10808319 Arabidopsis thaliana
AT1G30500 2.0kb upstream 2.0kb upstream 2000 false Chr1: 10806320-10808319 Arabidopsis thaliana
AT1G30500 2.0kb downstream 2.0kb downstream 3870 true Chr1: 10802450-10806319 Arabidopsis thaliana
AT1G30500 2.0kb downstream 2.0kb downstream 2000 false Chr1: 10802450-10804449 Arabidopsis thaliana
AT1G30500 5.0kb upstream 5.0kb upstream 6870 true Chr1: 10804450-10811319 Arabidopsis thaliana
AT1G30500 5.0kb upstream 5.0kb upstream 5000 false Chr1: 10806320-10811319 Arabidopsis thaliana
AT1G30500 5.0kb downstream 5.0kb downstream 6870 true Chr1: 10799450-10806319 Arabidopsis thaliana
AT1G30500 5.0kb downstream 5.0kb downstream 5000 false Chr1: 10799450-10804449 Arabidopsis thaliana
AT1G30500 10.0kb upstream 10.0kb upstream 11870 true Chr1: 10804450-10816319 Arabidopsis thaliana
AT1G30500 10.0kb upstream 10.0kb upstream 10000 false Chr1: 10806320-10816319 Arabidopsis thaliana
AT1G30500 10.0kb downstream 10.0kb downstream 11870 true Chr1: 10794450-10806319 Arabidopsis thaliana
AT1G30500 10.0kb downstream 10.0kb downstream 10000 false Chr1: 10794450-10804449 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371471 5261 Brassicaceae View MSA
123838778 5264 Brassicales-Malvales View MSA
124349978 5266 SBM View MSA
124254545 5268 Malvidae View MSA
124071541 5270 Rosid View MSA
123747394 5271 Pentapetalae View MSA
122791430 5272 Eudicot View MSA
122049545 5273 Angiosperm View MSA
121349728 5274 Embryophyte View MSA
123424382 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.263       High
cufflinks 2.677        
cufflinks 2.967        
cufflinks 3.498        
cufflinks 3.558        
cufflinks 1.642       Low

0 Strain