Gene : scpl18 A. thaliana TAIR10
Primary Identifier:  ? AT1G33540 Defline:  (1 of 16) 2.3.1.103 - Sinapoylglucose--sinapoylglucose O-sinapoyltransferase
Genomic Order:  3311 Name:  ? AT1G33540
Secondary Identifier:  ? PAC:19655880
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3301 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G33540 0.5kb upstream 0.5kb upstream 2852 true Chr1: 12162349-12165200 Arabidopsis thaliana
AT1G33540 0.5kb upstream 0.5kb upstream 500 false Chr1: 12164701-12165200 Arabidopsis thaliana
AT1G33540 0.5kb downstream 0.5kb downstream 2852 true Chr1: 12161849-12164700 Arabidopsis thaliana
AT1G33540 0.5kb downstream 0.5kb downstream 500 false Chr1: 12161849-12162348 Arabidopsis thaliana
AT1G33540 1.0kb upstream 1.0kb upstream 3352 true Chr1: 12162349-12165700 Arabidopsis thaliana
AT1G33540 1.0kb upstream 1.0kb upstream 1000 false Chr1: 12164701-12165700 Arabidopsis thaliana
AT1G33540 1.0kb downstream 1.0kb downstream 3352 true Chr1: 12161349-12164700 Arabidopsis thaliana
AT1G33540 1.0kb downstream 1.0kb downstream 1000 false Chr1: 12161349-12162348 Arabidopsis thaliana
AT1G33540 2.0kb upstream 2.0kb upstream 4352 true Chr1: 12162349-12166700 Arabidopsis thaliana
AT1G33540 2.0kb upstream 2.0kb upstream 2000 false Chr1: 12164701-12166700 Arabidopsis thaliana
AT1G33540 2.0kb downstream 2.0kb downstream 4352 true Chr1: 12160349-12164700 Arabidopsis thaliana
AT1G33540 2.0kb downstream 2.0kb downstream 2000 false Chr1: 12160349-12162348 Arabidopsis thaliana
AT1G33540 5.0kb upstream 5.0kb upstream 7352 true Chr1: 12162349-12169700 Arabidopsis thaliana
AT1G33540 5.0kb upstream 5.0kb upstream 5000 false Chr1: 12164701-12169700 Arabidopsis thaliana
AT1G33540 5.0kb downstream 5.0kb downstream 7352 true Chr1: 12157349-12164700 Arabidopsis thaliana
AT1G33540 5.0kb downstream 5.0kb downstream 5000 false Chr1: 12157349-12162348 Arabidopsis thaliana
AT1G33540 10.0kb upstream 10.0kb upstream 12352 true Chr1: 12162349-12174700 Arabidopsis thaliana
AT1G33540 10.0kb upstream 10.0kb upstream 10000 false Chr1: 12164701-12174700 Arabidopsis thaliana
AT1G33540 10.0kb downstream 10.0kb downstream 12352 true Chr1: 12152349-12164700 Arabidopsis thaliana
AT1G33540 10.0kb downstream 10.0kb downstream 10000 false Chr1: 12152349-12162348 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378201 5261 Brassicaceae View MSA
123841552 5264 Brassicales-Malvales View MSA
124347801 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.447        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.038        
cufflinks 0.007     Low Low
cufflinks 1.037        

0 Strain