Gene : HVA22G A. thaliana TAIR10
Primary Identifier:  ? AT1G75700 Defline:  (1 of 3) PTHR12300//PTHR12300:SF26 - HVA22-LIKE PROTEINS // HVA22-LIKE PROTEIN G-RELATED
Genomic Order:  6534 Name:  ? AT1G75700
Secondary Identifier:  ? PAC:19657476
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G75700 0.5kb upstream 0.5kb upstream 1536 true Chr1: 28423396-28424931 Arabidopsis thaliana
AT1G75700 0.5kb upstream 0.5kb upstream 500 false Chr1: 28423396-28423895 Arabidopsis thaliana
AT1G75700 0.5kb downstream 0.5kb downstream 1536 true Chr1: 28423896-28425431 Arabidopsis thaliana
AT1G75700 0.5kb downstream 0.5kb downstream 500 false Chr1: 28424932-28425431 Arabidopsis thaliana
AT1G75700 1.0kb upstream 1.0kb upstream 2036 true Chr1: 28422896-28424931 Arabidopsis thaliana
AT1G75700 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28422896-28423895 Arabidopsis thaliana
AT1G75700 1.0kb downstream 1.0kb downstream 2036 true Chr1: 28423896-28425931 Arabidopsis thaliana
AT1G75700 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28424932-28425931 Arabidopsis thaliana
AT1G75700 2.0kb upstream 2.0kb upstream 3036 true Chr1: 28421896-28424931 Arabidopsis thaliana
AT1G75700 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28421896-28423895 Arabidopsis thaliana
AT1G75700 2.0kb downstream 2.0kb downstream 3036 true Chr1: 28423896-28426931 Arabidopsis thaliana
AT1G75700 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28424932-28426931 Arabidopsis thaliana
AT1G75700 5.0kb upstream 5.0kb upstream 6036 true Chr1: 28418896-28424931 Arabidopsis thaliana
AT1G75700 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28418896-28423895 Arabidopsis thaliana
AT1G75700 5.0kb downstream 5.0kb downstream 6036 true Chr1: 28423896-28429931 Arabidopsis thaliana
AT1G75700 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28424932-28429931 Arabidopsis thaliana
AT1G75700 10.0kb upstream 10.0kb upstream 11036 true Chr1: 28413896-28424931 Arabidopsis thaliana
AT1G75700 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28413896-28423895 Arabidopsis thaliana
AT1G75700 10.0kb downstream 10.0kb downstream 11036 true Chr1: 28423896-28434931 Arabidopsis thaliana
AT1G75700 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28424932-28434931 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367018 5261 Brassicaceae View MSA
123799280 5264 Brassicales-Malvales View MSA
124350599 5266 SBM View MSA
124254389 5268 Malvidae View MSA
124074738 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.26     Low  
cufflinks 7.39       High
cufflinks 0.333        
cufflinks 4.923        
cufflinks 0.153     Low Low
cufflinks 5.958        

0 Strain