Gene : AT1G77060 A. thaliana TAIR10
Defline:  (1 of 2) 2.7.8.23 - Carboxyvinyl-carboxyphosphonate phosphorylmutase / CPEP phosphonomutase Genomic Order:  6675
Name:  ? AT1G77060 Secondary Identifier:  ? PAC:19652049
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77060 0.5kb upstream 0.5kb upstream 2325 true Chr1: 28951685-28954009 Arabidopsis thaliana
AT1G77060 0.5kb upstream 0.5kb upstream 500 false Chr1: 28953510-28954009 Arabidopsis thaliana
AT1G77060 0.5kb downstream 0.5kb downstream 2325 true Chr1: 28951185-28953509 Arabidopsis thaliana
AT1G77060 0.5kb downstream 0.5kb downstream 500 false Chr1: 28951185-28951684 Arabidopsis thaliana
AT1G77060 1.0kb upstream 1.0kb upstream 2825 true Chr1: 28951685-28954509 Arabidopsis thaliana
AT1G77060 1.0kb upstream 1.0kb upstream 1000 false Chr1: 28953510-28954509 Arabidopsis thaliana
AT1G77060 1.0kb downstream 1.0kb downstream 2825 true Chr1: 28950685-28953509 Arabidopsis thaliana
AT1G77060 1.0kb downstream 1.0kb downstream 1000 false Chr1: 28950685-28951684 Arabidopsis thaliana
AT1G77060 2.0kb upstream 2.0kb upstream 3825 true Chr1: 28951685-28955509 Arabidopsis thaliana
AT1G77060 2.0kb upstream 2.0kb upstream 2000 false Chr1: 28953510-28955509 Arabidopsis thaliana
AT1G77060 2.0kb downstream 2.0kb downstream 3825 true Chr1: 28949685-28953509 Arabidopsis thaliana
AT1G77060 2.0kb downstream 2.0kb downstream 2000 false Chr1: 28949685-28951684 Arabidopsis thaliana
AT1G77060 5.0kb upstream 5.0kb upstream 6825 true Chr1: 28951685-28958509 Arabidopsis thaliana
AT1G77060 5.0kb upstream 5.0kb upstream 5000 false Chr1: 28953510-28958509 Arabidopsis thaliana
AT1G77060 5.0kb downstream 5.0kb downstream 6825 true Chr1: 28946685-28953509 Arabidopsis thaliana
AT1G77060 5.0kb downstream 5.0kb downstream 5000 false Chr1: 28946685-28951684 Arabidopsis thaliana
AT1G77060 10.0kb upstream 10.0kb upstream 11825 true Chr1: 28951685-28963509 Arabidopsis thaliana
AT1G77060 10.0kb upstream 10.0kb upstream 10000 false Chr1: 28953510-28963509 Arabidopsis thaliana
AT1G77060 10.0kb downstream 10.0kb downstream 11825 true Chr1: 28941685-28953509 Arabidopsis thaliana
AT1G77060 10.0kb downstream 10.0kb downstream 10000 false Chr1: 28941685-28951684 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376930 5261 Brassicaceae View MSA
123838053 5264 Brassicales-Malvales View MSA
124349650 5266 SBM View MSA
124244496 5268 Malvidae View MSA
124037337 5270 Rosid View MSA
123747963 5271 Pentapetalae View MSA
122789169 5272 Eudicot View MSA
122045509 5273 Angiosperm View MSA
121345252 5274 Embryophyte View MSA
123424326 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.582        
cufflinks 23.473        
cufflinks 31.36     High High
cufflinks 13.546        
cufflinks 30.703     High High
cufflinks 14.183        

0 Strain