Gene : AT1G71710 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  6125
Name:  ? AT1G71710 Secondary Identifier:  ? PAC:19650621
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6358 Arabidopsis thaliana pathologic  
Athaliana PWY-6363 Arabidopsis thaliana pathologic  
Athaliana PWY-6364 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G71710 0.5kb upstream 0.5kb upstream 7963 true Chr1: 26973567-26981529 Arabidopsis thaliana
AT1G71710 0.5kb upstream 0.5kb upstream 500 false Chr1: 26981030-26981529 Arabidopsis thaliana
AT1G71710 0.5kb downstream 0.5kb downstream 7963 true Chr1: 26973067-26981029 Arabidopsis thaliana
AT1G71710 0.5kb downstream 0.5kb downstream 500 false Chr1: 26973067-26973566 Arabidopsis thaliana
AT1G71710 1.0kb upstream 1.0kb upstream 8463 true Chr1: 26973567-26982029 Arabidopsis thaliana
AT1G71710 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26981030-26982029 Arabidopsis thaliana
AT1G71710 1.0kb downstream 1.0kb downstream 8463 true Chr1: 26972567-26981029 Arabidopsis thaliana
AT1G71710 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26972567-26973566 Arabidopsis thaliana
AT1G71710 2.0kb upstream 2.0kb upstream 9463 true Chr1: 26973567-26983029 Arabidopsis thaliana
AT1G71710 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26981030-26983029 Arabidopsis thaliana
AT1G71710 2.0kb downstream 2.0kb downstream 9463 true Chr1: 26971567-26981029 Arabidopsis thaliana
AT1G71710 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26971567-26973566 Arabidopsis thaliana
AT1G71710 5.0kb upstream 5.0kb upstream 12463 true Chr1: 26973567-26986029 Arabidopsis thaliana
AT1G71710 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26981030-26986029 Arabidopsis thaliana
AT1G71710 5.0kb downstream 5.0kb downstream 12463 true Chr1: 26968567-26981029 Arabidopsis thaliana
AT1G71710 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26968567-26973566 Arabidopsis thaliana
AT1G71710 10.0kb upstream 10.0kb upstream 17463 true Chr1: 26973567-26991029 Arabidopsis thaliana
AT1G71710 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26981030-26991029 Arabidopsis thaliana
AT1G71710 10.0kb downstream 10.0kb downstream 17463 true Chr1: 26963567-26981029 Arabidopsis thaliana
AT1G71710 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26963567-26973566 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364436 5261 Brassicaceae View MSA
123839810 5264 Brassicales-Malvales View MSA
124339394 5266 SBM View MSA
124241049 5268 Malvidae View MSA
124064481 5270 Rosid View MSA
123740737 5271 Pentapetalae View MSA
122795494 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.288        
cufflinks 2.642        
cufflinks 4.115       High
cufflinks 2.395       Low
cufflinks 3.184        
cufflinks 2.874        

0 Strain