Gene : TIR A. thaliana TAIR10
Primary Identifier:  ? AT1G72930 Defline:  (1 of 21) PTHR11017:SF169 - DISEASE RESISTANCE PROTEIN-RELATED
Genomic Order:  6251 Name:  ? AT1G72930
Secondary Identifier:  ? PAC:19655360
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G72930 0.5kb upstream 0.5kb upstream 1513 true Chr1: 27438952-27440464 Arabidopsis thaliana
AT1G72930 0.5kb upstream 0.5kb upstream 500 false Chr1: 27438952-27439451 Arabidopsis thaliana
AT1G72930 0.5kb downstream 0.5kb downstream 1513 true Chr1: 27439452-27440964 Arabidopsis thaliana
AT1G72930 0.5kb downstream 0.5kb downstream 500 false Chr1: 27440465-27440964 Arabidopsis thaliana
AT1G72930 1.0kb upstream 1.0kb upstream 2013 true Chr1: 27438452-27440464 Arabidopsis thaliana
AT1G72930 1.0kb upstream 1.0kb upstream 1000 false Chr1: 27438452-27439451 Arabidopsis thaliana
AT1G72930 1.0kb downstream 1.0kb downstream 2013 true Chr1: 27439452-27441464 Arabidopsis thaliana
AT1G72930 1.0kb downstream 1.0kb downstream 1000 false Chr1: 27440465-27441464 Arabidopsis thaliana
AT1G72930 2.0kb upstream 2.0kb upstream 3013 true Chr1: 27437452-27440464 Arabidopsis thaliana
AT1G72930 2.0kb upstream 2.0kb upstream 2000 false Chr1: 27437452-27439451 Arabidopsis thaliana
AT1G72930 2.0kb downstream 2.0kb downstream 3013 true Chr1: 27439452-27442464 Arabidopsis thaliana
AT1G72930 2.0kb downstream 2.0kb downstream 2000 false Chr1: 27440465-27442464 Arabidopsis thaliana
AT1G72930 5.0kb upstream 5.0kb upstream 6013 true Chr1: 27434452-27440464 Arabidopsis thaliana
AT1G72930 5.0kb upstream 5.0kb upstream 5000 false Chr1: 27434452-27439451 Arabidopsis thaliana
AT1G72930 5.0kb downstream 5.0kb downstream 6013 true Chr1: 27439452-27445464 Arabidopsis thaliana
AT1G72930 5.0kb downstream 5.0kb downstream 5000 false Chr1: 27440465-27445464 Arabidopsis thaliana
AT1G72930 10.0kb upstream 10.0kb upstream 11013 true Chr1: 27429452-27440464 Arabidopsis thaliana
AT1G72930 10.0kb upstream 10.0kb upstream 10000 false Chr1: 27429452-27439451 Arabidopsis thaliana
AT1G72930 10.0kb downstream 10.0kb downstream 11013 true Chr1: 27439452-27450464 Arabidopsis thaliana
AT1G72930 10.0kb downstream 10.0kb downstream 10000 false Chr1: 27440465-27450464 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122328845 5261 Brassicaceae Singleton cluster - no MSA
123841566 5264 Brassicales-Malvales View MSA
124350630 5266 SBM View MSA
124254426 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 156.268     High High
cufflinks 3.598        
cufflinks 49.292     High  
cufflinks 5.804        
cufflinks 62.492     High  
cufflinks 3.042       Low

0 Strain