Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT1G55950 0.5kb upstream | 0.5kb | upstream | 1112 | true | Chr1: 20926839-20927950 | Arabidopsis thaliana |
AT1G55950 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr1: 20927451-20927950 | Arabidopsis thaliana |
AT1G55950 0.5kb downstream | 0.5kb | downstream | 1112 | true | Chr1: 20926339-20927450 | Arabidopsis thaliana |
AT1G55950 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr1: 20926339-20926838 | Arabidopsis thaliana |
AT1G55950 1.0kb upstream | 1.0kb | upstream | 1612 | true | Chr1: 20926839-20928450 | Arabidopsis thaliana |
AT1G55950 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr1: 20927451-20928450 | Arabidopsis thaliana |
AT1G55950 1.0kb downstream | 1.0kb | downstream | 1612 | true | Chr1: 20925839-20927450 | Arabidopsis thaliana |
AT1G55950 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr1: 20925839-20926838 | Arabidopsis thaliana |
AT1G55950 2.0kb upstream | 2.0kb | upstream | 2612 | true | Chr1: 20926839-20929450 | Arabidopsis thaliana |
AT1G55950 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr1: 20927451-20929450 | Arabidopsis thaliana |
AT1G55950 2.0kb downstream | 2.0kb | downstream | 2612 | true | Chr1: 20924839-20927450 | Arabidopsis thaliana |
AT1G55950 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr1: 20924839-20926838 | Arabidopsis thaliana |
AT1G55950 5.0kb upstream | 5.0kb | upstream | 5612 | true | Chr1: 20926839-20932450 | Arabidopsis thaliana |
AT1G55950 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr1: 20927451-20932450 | Arabidopsis thaliana |
AT1G55950 5.0kb downstream | 5.0kb | downstream | 5612 | true | Chr1: 20921839-20927450 | Arabidopsis thaliana |
AT1G55950 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr1: 20921839-20926838 | Arabidopsis thaliana |
AT1G55950 10.0kb upstream | 10.0kb | upstream | 10612 | true | Chr1: 20926839-20937450 | Arabidopsis thaliana |
AT1G55950 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr1: 20927451-20937450 | Arabidopsis thaliana |
AT1G55950 10.0kb downstream | 10.0kb | downstream | 10612 | true | Chr1: 20916839-20927450 | Arabidopsis thaliana |
AT1G55950 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr1: 20916839-20926838 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122328098 | 5261 | Brassicaceae | View MSA |
123769478 | 5264 | Brassicales-Malvales | View MSA |
124268039 | 5266 | SBM | View MSA |
124124301 | 5268 | Malvidae | View MSA |
123853355 | 5270 | Rosid | View MSA |
123439443 | 5271 | Pentapetalae | View MSA |
122475039 | 5272 | Eudicot | View MSA |
122051487 | 5273 | Angiosperm | View MSA |
121348911 | 5274 | Embryophyte | View MSA |
123381074 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.161 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.303 | High | |||
cufflinks | 0.025 | Low | |||
cufflinks | 0.026 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed |