Gene : XW6 A. thaliana TAIR10
Primary Identifier:  ? AT1G58380 Defline:  (1 of 6) K02981 - small subunit ribosomal protein S2e (RP-S2e, RPS2)
Genomic Order:  4818 Name:  ? AT1G58380
Secondary Identifier:  ? PAC:19649933
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G58380 0.5kb upstream 0.5kb upstream 1725 true Chr1: 21688532-21690256 Arabidopsis thaliana
AT1G58380 0.5kb upstream 0.5kb upstream 500 false Chr1: 21688532-21689031 Arabidopsis thaliana
AT1G58380 0.5kb downstream 0.5kb downstream 1725 true Chr1: 21689032-21690756 Arabidopsis thaliana
AT1G58380 0.5kb downstream 0.5kb downstream 500 false Chr1: 21690257-21690756 Arabidopsis thaliana
AT1G58380 1.0kb upstream 1.0kb upstream 2225 true Chr1: 21688032-21690256 Arabidopsis thaliana
AT1G58380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21688032-21689031 Arabidopsis thaliana
AT1G58380 1.0kb downstream 1.0kb downstream 2225 true Chr1: 21689032-21691256 Arabidopsis thaliana
AT1G58380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21690257-21691256 Arabidopsis thaliana
AT1G58380 2.0kb upstream 2.0kb upstream 3225 true Chr1: 21687032-21690256 Arabidopsis thaliana
AT1G58380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21687032-21689031 Arabidopsis thaliana
AT1G58380 2.0kb downstream 2.0kb downstream 3225 true Chr1: 21689032-21692256 Arabidopsis thaliana
AT1G58380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21690257-21692256 Arabidopsis thaliana
AT1G58380 5.0kb upstream 5.0kb upstream 6225 true Chr1: 21684032-21690256 Arabidopsis thaliana
AT1G58380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21684032-21689031 Arabidopsis thaliana
AT1G58380 5.0kb downstream 5.0kb downstream 6225 true Chr1: 21689032-21695256 Arabidopsis thaliana
AT1G58380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21690257-21695256 Arabidopsis thaliana
AT1G58380 10.0kb upstream 10.0kb upstream 11225 true Chr1: 21679032-21690256 Arabidopsis thaliana
AT1G58380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21679032-21689031 Arabidopsis thaliana
AT1G58380 10.0kb downstream 10.0kb downstream 11225 true Chr1: 21689032-21700256 Arabidopsis thaliana
AT1G58380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21690257-21700256 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380805 5261 Brassicaceae View MSA
123836722 5264 Brassicales-Malvales View MSA
124337985 5266 SBM View MSA
124250272 5268 Malvidae View MSA
124064962 5270 Rosid View MSA
123747493 5271 Pentapetalae View MSA
122787433 5272 Eudicot View MSA
122047189 5273 Angiosperm View MSA
121344542 5274 Embryophyte View MSA
123424194 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.001        
cufflinks 44.891     High  
cufflinks 24.963        
cufflinks 48.809     High  
cufflinks 22.003       Low
cufflinks 58.501     High High

0 Strain