Gene : GTB1 A. thaliana TAIR10
Primary Identifier:  ? AT1G65440 Defline:  (1 of 2) K11292 - transcription elongation factor SPT6 (SUPT6H, SPT6)
Genomic Order:  5472 Name:  ? AT1G65440
Secondary Identifier:  ? PAC:19655538
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65440 0.5kb upstream 0.5kb upstream 8510 true Chr1: 24306611-24315120 Arabidopsis thaliana
AT1G65440 0.5kb upstream 0.5kb upstream 500 false Chr1: 24314621-24315120 Arabidopsis thaliana
AT1G65440 0.5kb downstream 0.5kb downstream 8510 true Chr1: 24306111-24314620 Arabidopsis thaliana
AT1G65440 0.5kb downstream 0.5kb downstream 500 false Chr1: 24306111-24306610 Arabidopsis thaliana
AT1G65440 1.0kb upstream 1.0kb upstream 9010 true Chr1: 24306611-24315620 Arabidopsis thaliana
AT1G65440 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24314621-24315620 Arabidopsis thaliana
AT1G65440 1.0kb downstream 1.0kb downstream 9010 true Chr1: 24305611-24314620 Arabidopsis thaliana
AT1G65440 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24305611-24306610 Arabidopsis thaliana
AT1G65440 2.0kb upstream 2.0kb upstream 10010 true Chr1: 24306611-24316620 Arabidopsis thaliana
AT1G65440 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24314621-24316620 Arabidopsis thaliana
AT1G65440 2.0kb downstream 2.0kb downstream 10010 true Chr1: 24304611-24314620 Arabidopsis thaliana
AT1G65440 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24304611-24306610 Arabidopsis thaliana
AT1G65440 5.0kb upstream 5.0kb upstream 13010 true Chr1: 24306611-24319620 Arabidopsis thaliana
AT1G65440 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24314621-24319620 Arabidopsis thaliana
AT1G65440 5.0kb downstream 5.0kb downstream 13010 true Chr1: 24301611-24314620 Arabidopsis thaliana
AT1G65440 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24301611-24306610 Arabidopsis thaliana
AT1G65440 10.0kb upstream 10.0kb upstream 18010 true Chr1: 24306611-24324620 Arabidopsis thaliana
AT1G65440 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24314621-24324620 Arabidopsis thaliana
AT1G65440 10.0kb downstream 10.0kb downstream 18010 true Chr1: 24296611-24314620 Arabidopsis thaliana
AT1G65440 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24296611-24306610 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360860 5261 Brassicaceae View MSA
123837242 5264 Brassicales-Malvales View MSA
124344276 5266 SBM View MSA
124242204 5268 Malvidae View MSA
124072790 5270 Rosid View MSA
123737056 5271 Pentapetalae View MSA
122788563 5272 Eudicot View MSA
122044627 5273 Angiosperm View MSA
121347900 5274 Embryophyte View MSA
123426736 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.284        
cufflinks 7.417        
cufflinks 5.032       Low
cufflinks 8.027       High
cufflinks 5.664        
cufflinks 7.66        

0 Strain