Gene : SNRK2.10 A. thaliana TAIR10
Primary Identifier:  ? AT1G60940 Defline:  (1 of 4) PTHR24343:SF101 - SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED
Genomic Order:  4984 Name:  ? AT1G60940
Secondary Identifier:  ? PAC:19650903
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60940 0.5kb upstream 0.5kb upstream 3595 true Chr1: 22439123-22442717 Arabidopsis thaliana
AT1G60940 0.5kb upstream 0.5kb upstream 500 false Chr1: 22442218-22442717 Arabidopsis thaliana
AT1G60940 0.5kb downstream 0.5kb downstream 3595 true Chr1: 22438623-22442217 Arabidopsis thaliana
AT1G60940 0.5kb downstream 0.5kb downstream 500 false Chr1: 22438623-22439122 Arabidopsis thaliana
AT1G60940 1.0kb upstream 1.0kb upstream 4095 true Chr1: 22439123-22443217 Arabidopsis thaliana
AT1G60940 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22442218-22443217 Arabidopsis thaliana
AT1G60940 1.0kb downstream 1.0kb downstream 4095 true Chr1: 22438123-22442217 Arabidopsis thaliana
AT1G60940 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22438123-22439122 Arabidopsis thaliana
AT1G60940 2.0kb upstream 2.0kb upstream 5095 true Chr1: 22439123-22444217 Arabidopsis thaliana
AT1G60940 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22442218-22444217 Arabidopsis thaliana
AT1G60940 2.0kb downstream 2.0kb downstream 5095 true Chr1: 22437123-22442217 Arabidopsis thaliana
AT1G60940 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22437123-22439122 Arabidopsis thaliana
AT1G60940 5.0kb upstream 5.0kb upstream 8095 true Chr1: 22439123-22447217 Arabidopsis thaliana
AT1G60940 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22442218-22447217 Arabidopsis thaliana
AT1G60940 5.0kb downstream 5.0kb downstream 8095 true Chr1: 22434123-22442217 Arabidopsis thaliana
AT1G60940 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22434123-22439122 Arabidopsis thaliana
AT1G60940 10.0kb upstream 10.0kb upstream 13095 true Chr1: 22439123-22452217 Arabidopsis thaliana
AT1G60940 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22442218-22452217 Arabidopsis thaliana
AT1G60940 10.0kb downstream 10.0kb downstream 13095 true Chr1: 22429123-22442217 Arabidopsis thaliana
AT1G60940 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22429123-22439122 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379451 5261 Brassicaceae View MSA
123837053 5264 Brassicales-Malvales View MSA
124339700 5266 SBM View MSA
124249252 5268 Malvidae View MSA
124073506 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.923        
cufflinks 9.349        
cufflinks 11.226        
cufflinks 8.915        
cufflinks 12.339       High
cufflinks 7.719       Low

0 Strain