Gene : AT1G62370 A. thaliana TAIR10
Defline:  (1 of 14) PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Genomic Order:  5146
Name:  ? AT1G62370 Secondary Identifier:  ? PAC:19656822
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62370 0.5kb upstream 0.5kb upstream 1115 true Chr1: 23072075-23073189 Arabidopsis thaliana
AT1G62370 0.5kb upstream 0.5kb upstream 500 false Chr1: 23072075-23072574 Arabidopsis thaliana
AT1G62370 0.5kb downstream 0.5kb downstream 1115 true Chr1: 23072575-23073689 Arabidopsis thaliana
AT1G62370 0.5kb downstream 0.5kb downstream 500 false Chr1: 23073190-23073689 Arabidopsis thaliana
AT1G62370 1.0kb upstream 1.0kb upstream 1615 true Chr1: 23071575-23073189 Arabidopsis thaliana
AT1G62370 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23071575-23072574 Arabidopsis thaliana
AT1G62370 1.0kb downstream 1.0kb downstream 1615 true Chr1: 23072575-23074189 Arabidopsis thaliana
AT1G62370 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23073190-23074189 Arabidopsis thaliana
AT1G62370 2.0kb upstream 2.0kb upstream 2615 true Chr1: 23070575-23073189 Arabidopsis thaliana
AT1G62370 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23070575-23072574 Arabidopsis thaliana
AT1G62370 2.0kb downstream 2.0kb downstream 2615 true Chr1: 23072575-23075189 Arabidopsis thaliana
AT1G62370 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23073190-23075189 Arabidopsis thaliana
AT1G62370 5.0kb upstream 5.0kb upstream 5615 true Chr1: 23067575-23073189 Arabidopsis thaliana
AT1G62370 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23067575-23072574 Arabidopsis thaliana
AT1G62370 5.0kb downstream 5.0kb downstream 5615 true Chr1: 23072575-23078189 Arabidopsis thaliana
AT1G62370 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23073190-23078189 Arabidopsis thaliana
AT1G62370 10.0kb upstream 10.0kb upstream 10615 true Chr1: 23062575-23073189 Arabidopsis thaliana
AT1G62370 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23062575-23072574 Arabidopsis thaliana
AT1G62370 10.0kb downstream 10.0kb downstream 10615 true Chr1: 23072575-23083189 Arabidopsis thaliana
AT1G62370 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23073190-23083189 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363851 5261 Brassicaceae View MSA
123798629 5264 Brassicales-Malvales View MSA
124296238 5266 SBM View MSA
124250156 5268 Malvidae View MSA
124069437 5270 Rosid View MSA
123751393 5271 Pentapetalae View MSA
122796019 5272 Eudicot View MSA
122045882 5273 Angiosperm View MSA
121310523 5274 Embryophyte View MSA
123347984 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.83        
cufflinks 4.091        
cufflinks 0.889       Low
cufflinks 7.776       High
cufflinks 2.485        
cufflinks 5.326        

0 Strain