Gene : AT1G62305 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31042//PTHR31042:SF2 - FAMILY NOT NAMED // CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  5138
Name:  ? AT1G62305 Secondary Identifier:  ? PAC:19655152
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62305 0.5kb upstream 0.5kb upstream 3064 true Chr1: 23026776-23029839 Arabidopsis thaliana
AT1G62305 0.5kb upstream 0.5kb upstream 500 false Chr1: 23029340-23029839 Arabidopsis thaliana
AT1G62305 0.5kb downstream 0.5kb downstream 3064 true Chr1: 23026276-23029339 Arabidopsis thaliana
AT1G62305 0.5kb downstream 0.5kb downstream 500 false Chr1: 23026276-23026775 Arabidopsis thaliana
AT1G62305 1.0kb upstream 1.0kb upstream 3564 true Chr1: 23026776-23030339 Arabidopsis thaliana
AT1G62305 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23029340-23030339 Arabidopsis thaliana
AT1G62305 1.0kb downstream 1.0kb downstream 3564 true Chr1: 23025776-23029339 Arabidopsis thaliana
AT1G62305 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23025776-23026775 Arabidopsis thaliana
AT1G62305 2.0kb upstream 2.0kb upstream 4564 true Chr1: 23026776-23031339 Arabidopsis thaliana
AT1G62305 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23029340-23031339 Arabidopsis thaliana
AT1G62305 2.0kb downstream 2.0kb downstream 4564 true Chr1: 23024776-23029339 Arabidopsis thaliana
AT1G62305 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23024776-23026775 Arabidopsis thaliana
AT1G62305 5.0kb upstream 5.0kb upstream 7564 true Chr1: 23026776-23034339 Arabidopsis thaliana
AT1G62305 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23029340-23034339 Arabidopsis thaliana
AT1G62305 5.0kb downstream 5.0kb downstream 7564 true Chr1: 23021776-23029339 Arabidopsis thaliana
AT1G62305 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23021776-23026775 Arabidopsis thaliana
AT1G62305 10.0kb upstream 10.0kb upstream 12564 true Chr1: 23026776-23039339 Arabidopsis thaliana
AT1G62305 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23029340-23039339 Arabidopsis thaliana
AT1G62305 10.0kb downstream 10.0kb downstream 12564 true Chr1: 23016776-23029339 Arabidopsis thaliana
AT1G62305 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23016776-23026775 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375205 5261 Brassicaceae View MSA
123836991 5264 Brassicales-Malvales View MSA
124341705 5266 SBM View MSA
124249568 5268 Malvidae View MSA
124066667 5270 Rosid View MSA
123753722 5271 Pentapetalae View MSA
122788010 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.248        
cufflinks 1.152        
cufflinks 0.9       Low
cufflinks 1.606       High
cufflinks 1.263        
cufflinks 1.288        

0 Strain