Gene : WRKY6 A. thaliana TAIR10
Primary Identifier:  ? AT1G62300 Defline:  (1 of 72) PF03106 - WRKY DNA -binding domain (WRKY)
Genomic Order:  5136 Name:  ? AT1G62300
Secondary Identifier:  ? PAC:19654804
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62300 0.5kb upstream 0.5kb upstream 3097 true Chr1: 23016683-23019779 Arabidopsis thaliana
AT1G62300 0.5kb upstream 0.5kb upstream 500 false Chr1: 23019280-23019779 Arabidopsis thaliana
AT1G62300 0.5kb downstream 0.5kb downstream 3097 true Chr1: 23016183-23019279 Arabidopsis thaliana
AT1G62300 0.5kb downstream 0.5kb downstream 500 false Chr1: 23016183-23016682 Arabidopsis thaliana
AT1G62300 1.0kb upstream 1.0kb upstream 3597 true Chr1: 23016683-23020279 Arabidopsis thaliana
AT1G62300 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23019280-23020279 Arabidopsis thaliana
AT1G62300 1.0kb downstream 1.0kb downstream 3597 true Chr1: 23015683-23019279 Arabidopsis thaliana
AT1G62300 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23015683-23016682 Arabidopsis thaliana
AT1G62300 2.0kb upstream 2.0kb upstream 4597 true Chr1: 23016683-23021279 Arabidopsis thaliana
AT1G62300 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23019280-23021279 Arabidopsis thaliana
AT1G62300 2.0kb downstream 2.0kb downstream 4597 true Chr1: 23014683-23019279 Arabidopsis thaliana
AT1G62300 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23014683-23016682 Arabidopsis thaliana
AT1G62300 5.0kb upstream 5.0kb upstream 7597 true Chr1: 23016683-23024279 Arabidopsis thaliana
AT1G62300 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23019280-23024279 Arabidopsis thaliana
AT1G62300 5.0kb downstream 5.0kb downstream 7597 true Chr1: 23011683-23019279 Arabidopsis thaliana
AT1G62300 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23011683-23016682 Arabidopsis thaliana
AT1G62300 10.0kb upstream 10.0kb upstream 12597 true Chr1: 23016683-23029279 Arabidopsis thaliana
AT1G62300 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23019280-23029279 Arabidopsis thaliana
AT1G62300 10.0kb downstream 10.0kb downstream 12597 true Chr1: 23006683-23019279 Arabidopsis thaliana
AT1G62300 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23006683-23016682 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369405 5261 Brassicaceae View MSA
123838136 5264 Brassicales-Malvales View MSA
124338307 5266 SBM View MSA
124251291 5268 Malvidae View MSA
124069766 5270 Rosid View MSA
123749845 5271 Pentapetalae View MSA
122791302 5272 Eudicot View MSA
122048678 5273 Angiosperm View MSA
121350483 5274 Embryophyte View MSA
123381752 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.847       High
cufflinks 3.997       Low
cufflinks 5.243        
cufflinks 9.631        
cufflinks 7.831        
cufflinks 6.863        

0 Strain